Gene Dbac_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0642 
Symbol 
ID8376295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp716762 
End bp717934 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID644999884 
Productprotein of unknown function UPF0118 
Protein accessionYP_003157181 
Protein GI256828453 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTG ATTGCGGCCA AGGACCGACA AATGTAGCCG AACGGATCAT GCCCGCGCTG 
ATCAGAATTC TGGTCTGGGG CGGCGTGTTC GCGGTGGTAT TCATCCTGCG TTCCTTTTTT
CTGCTCCTTT TTTTGACGTT TGTTTTCGGG TATATCCAGA ATCGCGGCGT GAACAGGCTG
CAGGAGCTGA TCCCGAATCG ACCGCTCAGG GTCGTGTTGG TGGCGAGCAT TTTTTTGGGC
GTGCTCATCA CCGTGGGCGT GTTTCTGGTG CCTCGGGCCA AGGATCAGAC CGTCCTCTTC
GTCACGCAGC TTCCTCAGTA TGTGGAGCGC CTGGACCAGG AGCTGGGCGC GCTGGGTGAA
CGTTATCCCA TGATTGCCAA CGCCATACCC GAGCTTGGGG CTTTTGCGGA TCACTCCGCG
CCGGGCAACG GCAAATCCAG GGTCGCCGCT CTGGTGCAAC AGATTTTCAG CATGGGCGAC
CCGCCCGACG GGCAGCACAA GGTCAATCAG CTGCTTGATC TGGTGCGCGG CGTGGGAGGC
AGGATCGCGG CCATCGCCTC GGCCTTTCTC TTGGCACTGC TTTTCTCTTT TCTCATAGTG
CTCGACCTGC CCCGTCTTTC AGCCAGCGTG TGTTCCCTTG AAAATTCAAA GCTTGGTTTC
GTTTATCGCG AGGTGGCTGG CAGCATCAGG GATTTCGCCA CTGTCCTGGG CAAAGCCCTG
GAGGCGCAGT TCGTCATCGC TCTGGTCAAC GCCGCTCTCA CGGCCATCGG CGTGTCCTTG
CTCGGCCTGG GTTCATCCAT GGCTTTTTTG ACCGTGATCG TCTTCTTGTG CAGCTTCATT
CCCGTCCTGG GTGTTTTCAT CAGCTCTGTG CCGATCTGCC TCATCGCCTT GCAGGATTCG
GGGCTGACGA CCATGATACT GGGCATTGTC ATGATCACGG TCATTCACCT GCTTGAAGGG
TATGTGCTGA ACCCGAGGAT CTACGGTTCC TACATGCGCA TAAACCCCGT CATCGTGCTC
GTCATTTTGA CTGTCGGAGC CAAACTTTTT CATATCTGGG GGCTGGTGCT GGGCGTGCCC
ATCTGCACCT ATATTTTCGG ACACGTCATT CAGCACAAAG AGACGGTGGC GGCGGCGCCC
CTTCCGTGCC CCCGTGACGA CGATACGGAA TGA
 
Protein sequence
MTPDCGQGPT NVAERIMPAL IRILVWGGVF AVVFILRSFF LLLFLTFVFG YIQNRGVNRL 
QELIPNRPLR VVLVASIFLG VLITVGVFLV PRAKDQTVLF VTQLPQYVER LDQELGALGE
RYPMIANAIP ELGAFADHSA PGNGKSRVAA LVQQIFSMGD PPDGQHKVNQ LLDLVRGVGG
RIAAIASAFL LALLFSFLIV LDLPRLSASV CSLENSKLGF VYREVAGSIR DFATVLGKAL
EAQFVIALVN AALTAIGVSL LGLGSSMAFL TVIVFLCSFI PVLGVFISSV PICLIALQDS
GLTTMILGIV MITVIHLLEG YVLNPRIYGS YMRINPVIVL VILTVGAKLF HIWGLVLGVP
ICTYIFGHVI QHKETVAAAP LPCPRDDDTE