Gene Dbac_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0562 
Symbol 
ID8376215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp636190 
End bp637551 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content63% 
IMG OID644999805 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003157102 
Protein GI256828374 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.258161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATT TTGACATCAT TGTCATAGGT GCAGGTCCGG GCGGTTATGC CGCAGCTCTG 
CTCGCCAGTC AAAGAGGAAA AACGGTCGCC CTCATCGAGA AAGAGCACCT CGGAGGAACC
TGCCTGAACT GGGGATGCAT CCCCACCAAA CTCTACCTAG GAGCCACCGC TCACCTGGAG
GGCCTGCACG CCCAGTCGCG CCTGCGCCTG TGCAGCGGCT CCGTGCAGAT GGACATGGGC
GCGCTCAAGA AACGCAAAAA CGCCTTTGTC GCGGCGACCC ACAAGGCCAT GGGGTGCTGT
CTTGAGAAAC ATGGGGTCGC CCTGGTCCAA GGTCAAGCGT CCCTGATCGA TAAAAACACG
GTGCGTGTCG TCAGCGAGGC CGAACAGACT TTGAGCTTCA CGACGCTCAT CATCGCTTCG
GGCTCGTCCA CGAACTGGTT CCCGGGGCTT GAGCCCGATC ATGCGCGGAT TCTCGACTCC
ACGGATCTGC TTGATCTTGA TGAAGCGCCC GCGAGCCTCG CGGTCATCGG AGCAGGAGCC
ATCGGCCTTG AAATGGCCGA CTTCTGGCAT CGCCTGGGGA CGGCGATCCA CATCATCGAA
GCCGCCCCCC GCATCGCCCC CGCCGAAGAC GAGGAAATCG CGCAGACCCT TCACGGAATG
CTCAAGCGCA AAAAATGGAA CATCGTCACG GGCAAACGGG TGGCCGAGTT CGTCAATGAA
GGCGAATCGG TCCTGGTCAG GCTGGAGGAC GGCACTCAAA TCCGGGTCGA GAAGGCCCTG
GTCGCGGTTG GACGCAAACC GAACACTCCG GGCCTCGGGC TCGATAACGC AGGTGTTGCC
ATGACCGGCG CGGGCTGGGT CACGACCGAC GATTTTTTAC GGGCAACGCC GAACATCTAT
GCCATCGGCG ACGTCAACGG CCGCACCCTG CTGGCCCACG CGGCCGAGCA TCAGGGCCGC
TACGCCGTGC TGCACGCACT GGGTGAAACG ACTGCGGCCT ACACGCCAGG CCCCATTCCG
GGCTGCATCT ACGGCTCCAT CGAGGTCATG CGCGCCGGGC ATACCGCCGC CGAACTTGCG
GCCCAAGGCA AAACCGTGAC TGTTTCCCGC GCAAGCCTCG GTGCCAATCC CATCTCCCAG
GCCCACGGCC AGGCCCAGGG GCTGGTCAAG GTCGCATGGG TGGACGGCGT GGTGCATGGC
GTAACCGCCG TCGGACACGG GGCCTCGCAT CTGGTCACCC TGGCCGAGAT CATGGTCCGC
GACCGCTGGA CCGCGCATAC GGCGCACGAA CACATCTTCG CCCACCCCAC TCTGGACGAG
GCCCTGCGCG ATGCGCTCAT CGCCCCGCAG GAGGAAAAAT GA
 
Protein sequence
MSHFDIIVIG AGPGGYAAAL LASQRGKTVA LIEKEHLGGT CLNWGCIPTK LYLGATAHLE 
GLHAQSRLRL CSGSVQMDMG ALKKRKNAFV AATHKAMGCC LEKHGVALVQ GQASLIDKNT
VRVVSEAEQT LSFTTLIIAS GSSTNWFPGL EPDHARILDS TDLLDLDEAP ASLAVIGAGA
IGLEMADFWH RLGTAIHIIE AAPRIAPAED EEIAQTLHGM LKRKKWNIVT GKRVAEFVNE
GESVLVRLED GTQIRVEKAL VAVGRKPNTP GLGLDNAGVA MTGAGWVTTD DFLRATPNIY
AIGDVNGRTL LAHAAEHQGR YAVLHALGET TAAYTPGPIP GCIYGSIEVM RAGHTAAELA
AQGKTVTVSR ASLGANPISQ AHGQAQGLVK VAWVDGVVHG VTAVGHGASH LVTLAEIMVR
DRWTAHTAHE HIFAHPTLDE ALRDALIAPQ EEK