Gene Dbac_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0553 
Symbol 
ID8376205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp624789 
End bp625523 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID644999795 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_003157093 
Protein GI256828365 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCT TTGATCTGAA AAGCTTATGT GCCCGCCTCA GACCGGGCCC CGGGAAAACG 
AACCTGCCGC TGTTGGAGGA GAACAACCGT CTGTGCCGGG CACTGGATCA GACCCGCCCC
CTGGAAGACT ATGTCTATAC GGTCCTGGAT ACCGAACTGA CCGGGCTCTC CGCCCGCAGG
GAGGAGATCG TCTCCATCGG TGCCGTGCGC GTGCGCGGCC TGGCCATCGT GCCGGGCGAA
AGCTTCAGCG TCCTGGTGCG GCCCAGCATC CCCCTGCCCA AGACCAGCAC CCTCATCCAC
CGCATCACTC CCGAAGCCAT CGCCCAGGCT CCACCCCTGG CTGAGGTTCT TCCCGAGTTG
ATCGAATTCT GCAAAGGCAC TCTTATCGTC GGCCACCACG TGGGGCTGGA CATGAGTTTT
TTGAACCGTG CCTGCAGGAA AAACCACGGC CAGCCTTTGG CCAATCCTTG CCTGGACACC
ATGCGCATGG CCATGCTGTG GCGCGAGAAA CGTACGCCCT CGCATTATGA ACAGTTCAAT
CTCAGCATCT CCTACGTACT GACCGACCTG GCCCACGAAT TCGACCTGCC CCGCTTCACA
GCCCACGAGG CCCTGGGCGA CGCCCTGCAG ACAGCTTACC TCTTCATCTA TCTGGCCAAA
AAGATCGCCG GAAACAGACC CCTCACACTG CGCGAACTGT TCCGGGCCGG TCAAAGCTGG
CGCTGGTACA TGTAA
 
Protein sequence
MNLFDLKSLC ARLRPGPGKT NLPLLEENNR LCRALDQTRP LEDYVYTVLD TELTGLSARR 
EEIVSIGAVR VRGLAIVPGE SFSVLVRPSI PLPKTSTLIH RITPEAIAQA PPLAEVLPEL
IEFCKGTLIV GHHVGLDMSF LNRACRKNHG QPLANPCLDT MRMAMLWREK RTPSHYEQFN
LSISYVLTDL AHEFDLPRFT AHEALGDALQ TAYLFIYLAK KIAGNRPLTL RELFRAGQSW
RWYM