| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0388 |
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| Symbol | |
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| ID | 8376037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 459480 |
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| End bp | 460325 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644999629 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003156930 |
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| Protein GI | 256828202 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.327234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATT CTTTTTTTTA TCCTGAAGGC CTTCCGCCAA TCCGGCTGGA CAGAGTTTTG
GCTCTGCAGC TGGGATTTGG CGTCAGACGC TGCCGGGCCT TGATCGAAGC CGGCCGGGTT
CTGGTCGATG ACCGGCCGTG CGCCAAGGGC GCCCTGATCC GGCCGGGCCA GCATATTCGC
GTCTCGCTAC CCGAAGATGC CGCTCCTGAC TGCCACGATG TCCGCCTTGT CGACCGCAAC
GAGAGCTTCG CGGCGCTGGC CAAACCTGAC GGGTTGCATA CGGTGGCCGG ACAGGAGGCG
GCGTGTCTTG AATCCTGCCT GCCCGGGCTT GGGCTCGAAG GCTGGGAGCT GCTCAACCGC
CTGGACTGCC TGACCAGCGG GCTGGTCCTG GCCGCGGCCG AAAAGCGGGA TGCGGCGGCA
TATAAAGTTT GGCAGGACGC CGGCCAGGTC AGCAAATGGT ATCTGGCTTT GGCCCGTGGC
GAAGTGGCGA CTCTGGAATG CCGGGGGCGG ATTCTGGACG ACAAGCGCAG CGTCGTGCGC
GTGACCGCGG ATGAGGACGA ACCCCTGCGC TGGACCCGGG TCCGCGCGCT GCGCCAAATT
GACGGCAATA CGCTGCTGCT GGTGAAGATA TTTAAAGGGC GCAGGCATCA GATTCGCGCC
CACCTCGCGC ATGCGGGCCA TCCGCTGATC GGCGACCCGG TCTACGGCGT GTGCGAACCC
GGCGGGCTGT ATCTGCACCA CTGGCGTCTT GACATGCCCG GCTTCACGGC CTCGCTTTTG
CCGGATTGGC CGTGCGTCGA TTCCGTGCAA GTGGAAGGCC TTTTGTCTGC CTTTGATTCC
GATTGA
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| Protein sequence | MTDSFFYPEG LPPIRLDRVL ALQLGFGVRR CRALIEAGRV LVDDRPCAKG ALIRPGQHIR
VSLPEDAAPD CHDVRLVDRN ESFAALAKPD GLHTVAGQEA ACLESCLPGL GLEGWELLNR
LDCLTSGLVL AAAEKRDAAA YKVWQDAGQV SKWYLALARG EVATLECRGR ILDDKRSVVR
VTADEDEPLR WTRVRALRQI DGNTLLLVKI FKGRRHQIRA HLAHAGHPLI GDPVYGVCEP
GGLYLHHWRL DMPGFTASLL PDWPCVDSVQ VEGLLSAFDS D
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