Gene Dbac_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0200 
Symbol 
ID8375836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp234964 
End bp236214 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content57% 
IMG OID644999430 
ProductATP-dependent Clp protease, ATP-binding subunit ClpX 
Protein accessionYP_003156743 
Protein GI256828015 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.855079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAA GAAAAAAAAG AACTGGCAAG GATCTGACCT GCTCTTTTTG CGGAAAGGGA 
CAGGACGAAG TGTTGCGACT CATTGCCGGT CCGGATGTAT ACATCTGCAA TGAATGCATT 
GGCCTGTGCG ATGACATTTT GAAAAATGAC AATCGCAAGG AAGATATTGA TTCATCGGAC 
ATCCCGTTGC CCCAGGAGAT CAAGGCCGCC CTGGATGATT ACGTGGTCGG CCAGGACGAC 
GCCAAGAAGA TCCTGTCCGT GGCAGTGTAC AACCACTATA AGCGCATCAA GTACCACGCC 
CTGGTCAAGG ATGACGTGGA ACTCGACAAG AGCAACATTC TGCTGATCGG GCCCACGGGT 
TCGGGCAAGA CCCTGCTGGC ACAGACCCTG GCCCGCATCC TGAAAGTGCC CTTTGCCATC 
GCCGACGCCA CGACGCTGAC CGAGGCCGGG TACGTGGGCG AGGACGTGGA GAACATCCTG 
GTCCAGCTGG TGCAGAACGC CGACTACAAC CTGGAGACGG CGGCCAAGGG CATCATCTAT 
GTGGATGAGA TCGACAAGAT TTCGCGCAAG TCCGACAGCC CGTCCATCAC CCGCGACGTG 
TCCGGCGAGG GCGTGCAGCA GGCGCTTTTG AAGATCATCG AAGGGACCGT GGCCAACATC 
CCGCCCAAGG GCGGCCGCAA GCATCCGCAG CAGGAATTCA TCCGCCTTGA TACGTCGAAC 
ATCCTTTTCA TTGTCGGCGG GGCCTTCATC GGACTGGACG AAATGGTCAA GCAGCGCGTG 
CAGGGTTCGA GCATGGGTTT CGGCGCCACG ATGCGTCGCA AGCAGGACGA CAACACCGAC 
AGCCTGCTCA AACAGGTCCA CCCCATGGAC CTCATCCGTT TCGGACTTAT TCCTGAATTT 
ACAGGCCGCA TTTCGGTCAT CACCTCGCTC ACCGAATTGA ACGAGGACGA TCTGATGCGT 
ATCCTGCAGG AGCCCAAGAA CGCTCTCATC AAACAGTACC AGAAGATGTT CGAGCTTGAG 
AACGTGGAAC TCAAATTCAC GCAAAATGCC TTGAAGGCCC TGGCCGCCAG AGCCATCAAG 
CTGGAAACCG GGGCCCGGGG CCTGCGGTCC GTGATGGAAT CCATCATGCT CGACATCATG 
TACACTCTGC CGTCCACCAA GGACGTGACG GAATGCGTTA TCAACAAGGC CGTGGTGGAA 
GAGGGCAAGG AACCTTTGCT CCTGTACAAA CCCGAGGCCA AGAGCGCCTG A
 
Protein sequence
MAERKKRTGK DLTCSFCGKG QDEVLRLIAG PDVYICNECI GLCDDILKND NRKEDIDSSD 
IPLPQEIKAA LDDYVVGQDD AKKILSVAVY NHYKRIKYHA LVKDDVELDK SNILLIGPTG 
SGKTLLAQTL ARILKVPFAI ADATTLTEAG YVGEDVENIL VQLVQNADYN LETAAKGIIY 
VDEIDKISRK SDSPSITRDV SGEGVQQALL KIIEGTVANI PPKGGRKHPQ QEFIRLDTSN 
ILFIVGGAFI GLDEMVKQRV QGSSMGFGAT MRRKQDDNTD SLLKQVHPMD LIRFGLIPEF 
TGRISVITSL TELNEDDLMR ILQEPKNALI KQYQKMFELE NVELKFTQNA LKALAARAIK 
LETGARGLRS VMESIMLDIM YTLPSTKDVT ECVINKAVVE EGKEPLLLYK PEAKSA