Gene Daud_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2052 
Symbol 
ID6026503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2162641 
End bp2162985 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content56% 
IMG OID641594873 
Producthistidine triad (HIT) protein 
Protein accessionYP_001718174 
Protein GI169832192 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGACT GTATCTTCTG CCGGATCGTG AACCGGGAAA TTCCGGCGGA TGTGGTTTAC 
GAGGATGAAC ACCTCCTGGC TTTTAAGGAC ATAAACCCGG TGGCTCCTGT ACACCTGCTT
TTTATTCCGA AGCGGCACAT CCCGACCCTG TTTGATCTTC AGGACGGAGA CGAACGGTTG
CTGGGGCTGC TCCAGAAGGC GGCCGTACAG GTGGCCCGTG ACTTGGGCCT CGAAGAGCGG
GGCTTTAGAC TTGTCACCAA CTGCCAGGAA GACGGGGGAC AATACGTCTT CCATGTTCAC
TACCATCTTC TTGCAGGACG GGAATTGAAC TGGCCTCCCG GCTAA
 
Protein sequence
MQDCIFCRIV NREIPADVVY EDEHLLAFKD INPVAPVHLL FIPKRHIPTL FDLQDGDERL 
LGLLQKAAVQ VARDLGLEER GFRLVTNCQE DGGQYVFHVH YHLLAGRELN WPPG