Gene Daud_1572 details

Gene Information

• Locus tag: Daud_1572
• ID: 6026461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: -
• Start bp: 1659125
• End bp: 1661107
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641594395
• Product: acetate--CoA ligase
• Protein accession: YP_001717706
• Protein GI: 169831724
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCGTCA AGAAGGAGAC TATCGAAACC CTACTCGAGG AGAGCCGCAT ATTTCACCCC 
GACGAGCAGT TCACCCGGCA GGCCAACGTC AAGAACCGGG ACATTTACGC CGAGGCCCGG 
GCGAACCCGC GGATTTTCTG GGCGATGCAG GCCGAGCGTC TGGACTGGTA CCGCAAATGG 
GACCAGGTCC TGGATTGGGA GCCCCCGTTC GCCAAATGGT TCGTGAACGG GAAGCTGAAC 
GCGTGTTACA ACTGCGTCGA CCGGCACCTC AACACCTGGC GGAAGAACAA GGCCGCCATC 
ATCTTTGAGG GTGAACCGGG GGATAGTCGA ATTCTGACCT ATTGGGACCT ATGGCGCGAG 
GTCACCCAGT TCGCCAATGT GCTACGCATG TTGGGGGTCC GGAAGGGCGA CCGCGTGGCC 
ATCTACCTGC CCATGATCGC CGAGGCGGCT ATCGCCATGC TGGCCTGCGC CCGGATCGGC 
GCGCCCCACA GCGTGGTGTT CGGAGGGTTT TCCGCCGAAG CGCTGCGCGA CCGTATCAAC 
GACGCCGGGG CGAAGCTCTT GATTACTGCG GACGGCGGCT GGCGCCGGGG CAAAATCGTG 
CCTCTGAAGC GGAACGCCGA TGCGGCCCTG ACGGAGTGCC CGTCCGTGGA CAAGGTCCTG 
GTGGTCAAGC GCACCGGCCA GGAAGTGCCG ATGCAGGATG GGCGCGACTA CTGGTACGAC 
AACCTGGTGG TCGGGGTGAC CGTAGGCGGG CCGTGTGAGG AAATGGACTC CGAGGATATG 
CTCTTCATTC TGTATACGAG CGGTACCACC GGCAAGCCCA AGGGTGTGGT CCATACTACC 
GGCGGCTACC TGACCGGGGT TTCCACCACC CACCATATGG TCTTCGACAT CAAGGATCGT 
GATGTTTACT GGTGCACGGC GGACGTCGGC TGGGTTACCG GGCACAGCTA CGTGGTTTAC 
GGACCGCTGG CGAACGGGGC GACGACGGTG ATTTACGAGG GGGCGCCCGA CTTCCCCGAG 
TTCGACCGCT TCTGGGCGAT CATTGAGCGC TACGGGGTGA ACGTATTCTA CACCGCGCCC 
ACGGCCATTC GGGCCTTTAT GAAGTGGGGC GAGGAGTGGC CTGCCCGGCG CGATCTTTCC 
AGCCTGCGCC TTTTAGGCAC GGTCGGTGAG CCGATCAACC CGGAGGCCTG GATCTGGTAC 
CACAAGCACA TCGGGTCGGA ACGGTGCCCG ATTGTGGATA CCTGGTGGCA GACCGAAACC 
GGGATGATCA TGATCAGCGC CCTGCCGGGG ATCATCTCCA CGAAGCCGGG CTCAGCTTCG 
GTGCCGCTCC CGGGCGTAGA GATCGACGTG GTCGACAAGG AAGGGAACTC GGTGATGCTG 
GGCAAAGGCG GCTTTCTGGT GATCAAGGAG CCCTGGCCGG CCATGCTCCG CACCATTTAC 
GGCGATAACG AGCGGTACGT GCGCGAGTAC TGGGGCAAGA TTCCGGGCCA CACCCTGTAC 
TTCTCCGGGG ACGGTGCGCG CCGCGACTAT CACAACTACT TCTGGATCCT GGGCCGGGTC 
GACGACGTGA TCAACGTGGC CGGACACCGG CTGAGCACCA TGGAAATCGA GAGCGCGCTG 
GTCGATCACC CCTGGGTGGC CGAATCGGCA GCGATCGGCA AGGCGCACGA TCTCAAGGGG 
CAGGCCATCT CGGTGTTCGT GACTTTGAAA GGGAAGTACT TCAAGGAGCT CAAGGACGGG 
TCGAAGACAA GGGCCGAATT CACGTCCGAA CTCAAAGCCC ACGTGGTGAA GAAAATCGGG 
GCGATCGCCC GGCCAGACGA CATCTTCCTG ACCGCCGAAC TGCCGAAGAC CAGAAGCGGC 
AAGATCATGC GGCGCCTGCT GCGGGATATC GCCGAGGGCC GGGCCCTGGG CGACACCACC 
ACCCTGGCCG ACCCCGCGGT CTGCCGGGAA CTCAAGGAAA AGTACGAGAG CAAGGAATCT 
TAA 

 

Protein sequence

MAVKKETIET LLEESRIFHP DEQFTRQANV KNRDIYAEAR ANPRIFWAMQ AERLDWYRKW 
DQVLDWEPPF AKWFVNGKLN ACYNCVDRHL NTWRKNKAAI IFEGEPGDSR ILTYWDLWRE 
VTQFANVLRM LGVRKGDRVA IYLPMIAEAA IAMLACARIG APHSVVFGGF SAEALRDRIN 
DAGAKLLITA DGGWRRGKIV PLKRNADAAL TECPSVDKVL VVKRTGQEVP MQDGRDYWYD 
NLVVGVTVGG PCEEMDSEDM LFILYTSGTT GKPKGVVHTT GGYLTGVSTT HHMVFDIKDR 
DVYWCTADVG WVTGHSYVVY GPLANGATTV IYEGAPDFPE FDRFWAIIER YGVNVFYTAP 
TAIRAFMKWG EEWPARRDLS SLRLLGTVGE PINPEAWIWY HKHIGSERCP IVDTWWQTET 
GMIMISALPG IISTKPGSAS VPLPGVEIDV VDKEGNSVML GKGGFLVIKE PWPAMLRTIY 
GDNERYVREY WGKIPGHTLY FSGDGARRDY HNYFWILGRV DDVINVAGHR LSTMEIESAL 
VDHPWVAESA AIGKAHDLKG QAISVFVTLK GKYFKELKDG SKTRAEFTSE LKAHVVKKIG 
AIARPDDIFL TAELPKTRSG KIMRRLLRDI AEGRALGDTT TLADPAVCRE LKEKYESKES