Gene Daud_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1405 
Symbol 
ID6026231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp1490813 
End bp1491424 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID641594226 
Producthypothetical protein 
Protein accessionYP_001717546 
Protein GI169831564 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID[TIGR02840] putative sporulation protein YtaF 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.27094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATTAG TGGCTTTGTT GGTTTTTGGG TTCGCATTGA GCCTGGACGG CTTTGGTGCC 
GGCCTAGCTT ACGGGTTGCG TCAAATCAGG GTCCCCATAG TGTCGATGGT TATTATCAGC 
CTGACCTCGG GACTGGCGAT CAGTGTTTCC CTGCTCTTGG GGCATTTGGC GGCTCAGGGA 
ATCCCCCCGG ATCCGGCCCG GCACCTAGGG GGGGCGCTTT TGATTTTGCT GGGGTTCTGG 
ATTTTGCTCC AGGCCCTGCG CAGTTCCACC CGGAAGACGC TGAGCATTCG GATTCCTCAG 
TTGGGGATGG TCATTCAGGT GCTTCTGGAG CCGCTGGATG CCGACATGGA CGGTTCCGGG 
TGCATTTCCG CCCGGGAGGC GGCGGTGTTG GGAGTAGCCT TGGCGCTGGA CGCCTTCGCC 
GCCGGGTTCG CCATCGCGCT GTCGGGCCTG TTTTCCGTGT TCGTGCCCTT GTTCGTGGTG 
GTCGGGTTGT TTGTGCTGCT GCACCTGGGC ATGGTGATGG GGGAGCGTTC CGCCCACCTC 
CTGAGCGACA AGTTCAGCCT CCTACCCGGC TGCCTGCTCA TCGTCCTGGG TGTGTTGCGC 
ACAATCGCGT AG
 
Protein sequence
MELVALLVFG FALSLDGFGA GLAYGLRQIR VPIVSMVIIS LTSGLAISVS LLLGHLAAQG 
IPPDPARHLG GALLILLGFW ILLQALRSST RKTLSIRIPQ LGMVIQVLLE PLDADMDGSG 
CISAREAAVL GVALALDAFA AGFAIALSGL FSVFVPLFVV VGLFVLLHLG MVMGERSAHL 
LSDKFSLLPG CLLIVLGVLR TIA