| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1224 |
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| Symbol | |
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| ID | 6025488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1285764 |
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| End bp | 1286537 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641594039 |
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| Product | FliA/WhiG family RNA polymerase sigma factor |
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| Protein accession | YP_001717367 |
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| Protein GI | 169831385 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02885] RNA polymerase sigma-F factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0121865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACGC GAATTGACCT TAACGTCCCC AATCACCCCC TGCTCAAGGA CCGGGAAACA
CGCCGCCTGC TGCGCCTATC CCAACAAGGC GATGTGTTGG CCAGGGAAAC ACTGATCAAC
GCCAACCTGA AACTGGTCTG CAACGTCATC AGGCGCTTCG AGGGTCGGGG CTACGACCCC
GACGATCTGT TCCAGATCGG CTGCATCGGA TTGATCAAGG CCATTGACAA GTTTGACCTC
CGTTTCAAAG TGAAGTTTTC CACCTACGCC GTACCCATGA TTATCGGGGA GATACGGCGT
TTTCTACGGG ACGACACGCC GCTGCGCGTC AGCCGGTCTT TGAAGGAGTT GGCCTGGAAA
GCGCAGTCCA CGCGTGAACA GCTTCAGGTG CGCCTGGACC GCGACCCCAC CATCGGTGAG
CTCGCCGAGG AACTGGGCAT ACCGCGCGAG GAACTGGTGG GTGCACTGGA GGCCGCCCAG
TCTCCAACCT CGTTGTACGA AGTGCTGCAC CAGGATGAAG GGGATCCGAT CCACGTCATG
GACCAGGTTC AGAACAAGGA GGAAAACGAA GGCGCTTGGG TGGAACGGAT CGCGCTGCAA
GAACTCCTGG ACAGCCTGCC GGAGCGGGAC CGGCGGATCG TGGTCTGGCG TTTTTTCGAG
GACAAAACCC AGGCCGAAGT GGCGCGCAAC CTGGGGCTCT CCCAGGTACA GGTGTCGCGG
CTGGAAAGGG AGGCGCTCAG GAAACTGAAG AGCATGGCCC GGGCCAAGCC GTAA
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| Protein sequence | MRTRIDLNVP NHPLLKDRET RRLLRLSQQG DVLARETLIN ANLKLVCNVI RRFEGRGYDP
DDLFQIGCIG LIKAIDKFDL RFKVKFSTYA VPMIIGEIRR FLRDDTPLRV SRSLKELAWK
AQSTREQLQV RLDRDPTIGE LAEELGIPRE ELVGALEAAQ SPTSLYEVLH QDEGDPIHVM
DQVQNKEENE GAWVERIALQ ELLDSLPERD RRIVVWRFFE DKTQAEVARN LGLSQVQVSR
LEREALRKLK SMARAKP
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