| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1084 |
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| Symbol | |
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| ID | 6026393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1142591 |
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| End bp | 1143355 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641593899 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_001717228 |
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| Protein GI | 169831246 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000583764 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTTTGG GCCGGTTTGC ACGCGGGGAT GAAACCTTCT ACGGCCGGTT GAAGGCAGAT
GGGACGGTGG TCCGGCTAGA CGGCGGTCTT GATTCGGAAT GGGCCAACGG TAGGGTGTAT
GGGCCGGGTG AGGTCCGAGC GCTGGCTCCC TGCACCCCGT CCAAGATCGT GTGCGTGGGG
CTGAACCACC GGGAACACGC CCGGGAGCTG AACCATCCCC TTCCCGAAGA GCCCGTCCTG
TTCTTGAAAC CGCCCAGCGC CGTGATCGGT CCCGGAGAGG AGATCCTGCT CCCGCCCCAG
TCGGCGCGCG TGGACTACGA GGCCGAGCTG GCCCTGGTGA TTAGGCGGCG CGCGGTGAAT
CTTGACCCAG AACGGGCGGC GGAATACATT TTCGGCTATA CCGCGGCCAA CGACGTCACG
GCCCGGGACC TGCAGCAAAA GGACGGGCAG TGGACGCGGG CCAAGTCGTT TGACACCTTC
TGTTCCCTGG GTCCGTATAT TGTAGCGGGG CCACCGCCGG AGCAGATCAA GGTGGCCCTT
TATCTGAACG GGGAACAGCG GCAGAGTGCC TGCATCACTG ACCTGATCTT TGGTCCGGCG
GCCCTGGTAA GCTTTGTATC TCGGGTGATG ACCCTGGAAC CGGGGGACGT GATCCTGACC
GGCACCCCCG CCGGGGTGGG CCCCTTGCGG GTCGGCGACC GGGTGGAGGT GGAGGTTGGA
GACGTGGGAC GACTGGTAAA CGTAGTCGCC ACTAGACGAC CTTAG
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| Protein sequence | MLLGRFARGD ETFYGRLKAD GTVVRLDGGL DSEWANGRVY GPGEVRALAP CTPSKIVCVG
LNHREHAREL NHPLPEEPVL FLKPPSAVIG PGEEILLPPQ SARVDYEAEL ALVIRRRAVN
LDPERAAEYI FGYTAANDVT ARDLQQKDGQ WTRAKSFDTF CSLGPYIVAG PPPEQIKVAL
YLNGEQRQSA CITDLIFGPA ALVSFVSRVM TLEPGDVILT GTPAGVGPLR VGDRVEVEVG
DVGRLVNVVA TRRP
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