| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1054 |
|---|
| Symbol | |
|---|
| ID | 6027073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1109164 |
|---|
| End bp | 1110111 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641593866 |
|---|
| Product | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit |
|---|
| Protein accession | YP_001717198 |
|---|
| Protein GI | 169831216 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0825] Acetyl-CoA carboxylase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0375729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTG TGTTTGATTT TGAACGGCCG ATCTCGGAAC TGGAGACCAA GATTGAGGAG
TTAAAGCAGT TTTCCGCCGA GAAGGGGCTG GATTTGAAAC ACGAAATCGA GGTGCTCGCC
GAACGGGCGG CCACGCTTAA GAAAACCATT TACGGCGACC TGAGCCCTTG GCAGAAGGTG
CTCATTGCGC GGCACCCGGA CCGTCTGGGC TCGCGGGACT ACATTGAGAG CTTCTGCTCC
GAGTTCATCG AGCTCCACGG GGACCGGGCC TTCGGCGACG ATCCCGCCGT GATCGGCGGT
ATCGGCCGGA TGAACGGCTA TGTGGTCACC GTGGTGGGTC ACCAAAAGGG TCGGGACACC
AAGGAGAACC TGGCCCGCAA CTTCGGTATG ATTCACCCGG AGGGGTGCCG GAAGGTGCTG
CGGCTGGCCA GGCAGGCCGA AAAGTTCCAG CGGCCGCTGA TTTGCCTGAT CGACACTCCC
GGGGCACACT GCGGCATCGG GGCGGAGGAA CGCGGGCAGG CCGAAGCCAT CGCCCGGAAC
ATATCGGCTC TAAGCACACT ACGGGTGCCG ATCGTCGTGG TGGTCATCGG TGAGGGGGGC
AGCGGTGGCG CACTGGCGCT GGGGATCGGG GACCGCCTGT TAATGCAGGA GCACGCCGTT
TTTTCCGTCA GTTCCCCGGA AGCCTGTGCC AGCATATTGT GGAAGGATGC GGGCCGGGCC
CGTGAAGCTG CGGAGGTGCT GAAAATGACC GCCCAGGATC TGCTCTCCCT GGGAGTGATC
GATGAGATTG TTCCCGAACC CTTGGGCGGC GTCCACCGGG ATCCGGGGCA GGCGGTGGAG
ATGCTTCGGG AAAGCCTGTT CCGGAACCTT GATGAACTTT GCCGAATGGA CCTCGAACAA
TTACTGCAAG CCCGCTATCA TAAATACCGG ACAATCGGAA ACTTATAA
|
|---|
| Protein sequence | MPTVFDFERP ISELETKIEE LKQFSAEKGL DLKHEIEVLA ERAATLKKTI YGDLSPWQKV
LIARHPDRLG SRDYIESFCS EFIELHGDRA FGDDPAVIGG IGRMNGYVVT VVGHQKGRDT
KENLARNFGM IHPEGCRKVL RLARQAEKFQ RPLICLIDTP GAHCGIGAEE RGQAEAIARN
ISALSTLRVP IVVVVIGEGG SGGALALGIG DRLLMQEHAV FSVSSPEACA SILWKDAGRA
REAAEVLKMT AQDLLSLGVI DEIVPEPLGG VHRDPGQAVE MLRESLFRNL DELCRMDLEQ
LLQARYHKYR TIGNL
|
|---|
| |