| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1041 |
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| Symbol | |
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| ID | 6027582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1094025 |
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| End bp | 1094981 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641593853 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001717185 |
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| Protein GI | 169831203 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.225928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCAAGC TTACCAGGCG GGAATTCGTA AAAATGTGCG GTATGTCCGC CGCCGGGCTG
AGCCTGATGT CGCTGCTGGG TCCCCAGATC ACCCACGCAC TGGCCAAGGC GGTCGAGGAC
AAGGTGCCCG TCGTCTGGAT TCAGGGTGCG AGCTGCACCG GATGTTCGGT TTCGCTCCTG
AATGCCGTGG ATCCGTCCAT TGAGAAAGTG CTGCTCGAGG TTATCAGCCT GCGCTACCAC
CCGAACATAA TGGCCGCTTC CGGGTATCTG GGCACCGCGG TCATCGAGGA TGTGGCCGCC
CGGTTCGCCG GGGAGTTCAT CCTGGTCGTC GAAGGCGGCA TACCGGTGAA CGAGAAGGGC
AAGTATTGCG TAATCGGCAA ATTCGGTAAG AAAGAAATGA CCGCCCACGA GGCTCTGCTG
ACCCTGGGCG CCAAAGCCAA GGCGGTCGTG GCCGCCGGTC AATGTGCCGC CTTCGGCGGG
ATCCCGGCAG GGGCTCCGAA CCCGACCGGT GTGTTGGGCG TTGACGCGGT GCTCAATCCG
ATGCGCTATC GCCGGCCGCT GGCTAAAAAC GTGATCAATA TTTCCAACTG CCCGCTGCAT
CCGGACCACT TCCTCGGCAC CCTCACCTAT GTGTTGACCT ATAACGAAAT CCCCGAACTT
GACCGTTACG GGCGCCCGGT GATGTTTTAC GGGCAGTCCA TTCACGACAA CTGCCCCCGG
CGGCCTGACT TTGAAGCCGG CCGTTTCGCC GCCGTAATCG GGGACGAGGG CTGTCTGGCA
GGCCTGGGCT GCAAGGGGTT TATTGCTATG TCGGATTGTC CGCGACGGGG CTGGAACAGC
GGGACAAACT GGTGCATCGC GGCCGGGGCG CCGTGTTATG CTTGTTCGGA GCAGATCTTT
CCGGACGGGT GTTCCCCGAT TTACGGTGCG ATGCCGGTAA CCGGGAACGG CAGATAA
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| Protein sequence | MRKLTRREFV KMCGMSAAGL SLMSLLGPQI THALAKAVED KVPVVWIQGA SCTGCSVSLL
NAVDPSIEKV LLEVISLRYH PNIMAASGYL GTAVIEDVAA RFAGEFILVV EGGIPVNEKG
KYCVIGKFGK KEMTAHEALL TLGAKAKAVV AAGQCAAFGG IPAGAPNPTG VLGVDAVLNP
MRYRRPLAKN VINISNCPLH PDHFLGTLTY VLTYNEIPEL DRYGRPVMFY GQSIHDNCPR
RPDFEAGRFA AVIGDEGCLA GLGCKGFIAM SDCPRRGWNS GTNWCIAAGA PCYACSEQIF
PDGCSPIYGA MPVTGNGR
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