| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0975 |
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| Symbol | |
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| ID | 6026413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1031983 |
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| End bp | 1033107 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641593787 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_001717119 |
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| Protein GI | 169831137 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGTCA AGCAACTGGT GAAAAGGATT CTGCCCCAGC GCACCACCTT TACGGCCGTG
GACTACGGCA CGCGGGCGAT CAAGGTCGCG ACGGTGAGCC TGGCGGGGCC CCAGCCCACG
CTGCTGCAAC TGGTGCGAAC GGCCCAGCCG GAGCTCGGGA ACGATGAGAC CGACGAGGGG
GCCCGGCTGA GTCGGCTGGC GGAGGCGGTG GATGCGGCAG GGATCAAGGG CCAGCACGTG
TTTGCCGCCC TGGGGGCGGA CAAGGTCATC ACGCGCCTTG TCCGGGTGCC CAGAATGCCG
GAAAAGGAAC TGGCCTCGGC GGTCAGTTTC GAGGCGGAAA AGTCCATCCC CATTCCGTTG
TCGGACCTGA TCGTGCGGTA CGTCAAGCTG GGTGAAACCG AGGGCGAGGA TGGGACGCAG
CAGCAGTTAT TGCTGGCGGC GGTGCCGGCG CAGGTGGTGC ACGATTTCTA CGAGCTGTTT
GTCCAGGCCG GCGTGACCAT CTCAGCCCTG GACTTGCAGC CGCTGGCCCT CTGGCGGGTG
TTGGGCGGGG TGGTCGGCCA CGAGGAACAT CCCGCGGAGG TGGTGGCCGT GGCCGACCTG
GGCGCGGCGC ACACGACACT CATTGTGGTT GACCGGGGGG CGCTGGTATT CTGTCATTCG
CTGGGTGTGG GCGGAGACCT GCTGACCAAG TCCATGGCCG ACACGTACGG GATCGATTTC
GGCGAGGCGC AGCAATTGAA AGAGAAGAGC GGGAAGATCC TATCGGCGGA GGAGGCGGCG
AACATCACCT CGCCCGACGA GATGCAGCTG GACTTTTCCC TCCGGGACGG CCTGGGCGAA
ATTGTGCGGG AACTCCGCCG GGCGTTGGAT TATTACGCCG CGGGCAAAAA CGCCCGGCCG
ATCAAAAGGT TGGTGTTGAG CGGGGGGACC TGCAATCTCA AAGGATTCGT GTCCTTTATG
GCTGAGGCCC TGGAGTTCCC GGTGGAACTC GGTACCCTGC CGTTTGCGGT ACCCGAGGGC
GTTGAGGCGG AGATGTCGGT GTGCGATCCG GCGATGTTCA TGGCGGTGGG GCTGGCTTTA
CGTGAGGCGC GGTTCAGCCT CACCAGGCCG GGGAAGGGGG ACTGA
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| Protein sequence | MNVKQLVKRI LPQRTTFTAV DYGTRAIKVA TVSLAGPQPT LLQLVRTAQP ELGNDETDEG
ARLSRLAEAV DAAGIKGQHV FAALGADKVI TRLVRVPRMP EKELASAVSF EAEKSIPIPL
SDLIVRYVKL GETEGEDGTQ QQLLLAAVPA QVVHDFYELF VQAGVTISAL DLQPLALWRV
LGGVVGHEEH PAEVVAVADL GAAHTTLIVV DRGALVFCHS LGVGGDLLTK SMADTYGIDF
GEAQQLKEKS GKILSAEEAA NITSPDEMQL DFSLRDGLGE IVRELRRALD YYAAGKNARP
IKRLVLSGGT CNLKGFVSFM AEALEFPVEL GTLPFAVPEG VEAEMSVCDP AMFMAVGLAL
REARFSLTRP GKGD
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