| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0642 |
|---|
| Symbol | |
|---|
| ID | 6025644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 678873 |
|---|
| End bp | 679616 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641593471 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_001716808 |
|---|
| Protein GI | 169830826 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000131671 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG ACGGAAGAAC GGCCCTGGTA ACCGGGGCCT CACGCGGTAT CGGGCGGGCC
GTGGCCCTGG CTCTGGCCGC TGCGGGGGCC GACCTGATCG TGAACTACGC AAGCAACATC
CGGGCGGCGG AACAAGTAGC GGCAGAAGCC CAACGTTTCG GTTCCAGGGT ATTATTGTTC
CAGGCCGACG TATCCCGGCC GCAGGAAGCC GCGGACTTGG TCCAGGCTGG TCTGGACAAA
TTCGGACGTC TGGACATACT GGTGAATAAC GCCGGGATTA CGCGGGATAA CCTGCTATTA
CGGATGACGG ATCAGGATTG GGACGAAGTC ATAAACGTCA ATCTAAAAGG GGTTTTCAAT
ACCACCCGGG CGGCGCTCCG GCCGATGATC AGAGCCCGCC ACGGCCGGAT CATCATTATT
TCGTCCGTCA TCGGACTGCG GGGCAACGCG GGTCAGGCGA ATTATGCGGC GGCCAAGGCG
GGCCTGATCG GGTTCACCAA GTCGGTGGCC AGAGAGGTCG GCTCGCGGAG CATCACGGCG
AATGCGGTTG CGCCTGGTTT TATCCAGACC GAAATGACCG ATAAACTGGG CCCGGCGGTG
CGCGAGCGCA TGCTTTCCGA GATTCCCCTG GGGCGTCTGG GCACTCCCGA GGACGTGGCG
GCGCTCGTCA CCTTTCTGGC CAGTGATGCG GCCGGGTATA TCACCGGGCA GGTGATCGCC
GTCGACGGTG GAATGGCCAT GTAG
|
|---|
| Protein sequence | MKLDGRTALV TGASRGIGRA VALALAAAGA DLIVNYASNI RAAEQVAAEA QRFGSRVLLF
QADVSRPQEA ADLVQAGLDK FGRLDILVNN AGITRDNLLL RMTDQDWDEV INVNLKGVFN
TTRAALRPMI RARHGRIIII SSVIGLRGNA GQANYAAAKA GLIGFTKSVA REVGSRSITA
NAVAPGFIQT EMTDKLGPAV RERMLSEIPL GRLGTPEDVA ALVTFLASDA AGYITGQVIA
VDGGMAM
|
|---|
| |