Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0537 |
Symbol | |
ID | 6027037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 574077 |
End bp | 574865 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641593373 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_001716710 |
Protein GI | 169830728 |
COG category | [R] General function prediction only |
COG ID | [COG1099] Predicted metal-dependent hydrolases with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGAA TTGTAGATTC TCACACACAC GTTTCGTTGC TTCCGTACGA AGGGCTGGAA AACATGGCCC TGGCCGGGGT GAAAAAGATT ATCGGCTGTG CCATATTTTT TGGGGCAAAG CATGCGGAAA CACTCTTTGA CCATTTCCAC CAAATGTCAA CCCTTTCGGT GAAGAATGCT GCCGAAAATG GCATCAAGCT TTTCCTCGCA GTCGGCATTC ACCCCATGGG GACACCGGAA GACTGGCCCA GGGTGATCGA CGCCCTCCCA GGCTACTTGA AGATGAATGA CGTCGTCGGC TTAGGAGAAA TCGGCCTGCA TGAGGGAAGC CGGCGGGAGC AGGACGTGCT AAAGGAGCAA TTGAAGGTAG CCAAGGAACA CAGAGTACCG GTAATCCTTC ACACCCCGCC ACAGGACAGG GTGAAGATAA CCAACAAGAC GATTGAAATT GCCGCCGCCG TCGGGATGGA GCCCGGAAAA GTGATCATCG ACCACGCCAA TTTGGATATT ATTCACTTAA TCGAGGACTT TGGGGCCGTT CCCGGGCTCA CCATTCGCCA AGAAGGACTT ACGCCCCATC TGTTGCTGAA CCACCTGGAA CGTTTCCAGC GAGGGGTGCT AAACAGCGAT TACAGCAACC TCAAACCCAA CGACCCCCTG AGCGTTCCGA AGGCTGTGCG GTATCTGGAG CTGAACGGGG TCCCCCTGGA AATCATTGCC CGGATTGCAA GATACAATGC GGAGAAAGTT TTCGGCATTC AAACGACCGG CAGCACGACT CATTACTAA
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Protein sequence | MEGIVDSHTH VSLLPYEGLE NMALAGVKKI IGCAIFFGAK HAETLFDHFH QMSTLSVKNA AENGIKLFLA VGIHPMGTPE DWPRVIDALP GYLKMNDVVG LGEIGLHEGS RREQDVLKEQ LKVAKEHRVP VILHTPPQDR VKITNKTIEI AAAVGMEPGK VIIDHANLDI IHLIEDFGAV PGLTIRQEGL TPHLLLNHLE RFQRGVLNSD YSNLKPNDPL SVPKAVRYLE LNGVPLEIIA RIARYNAEKV FGIQTTGSTT HY
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