| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0395 |
|---|
| Symbol | |
|---|
| ID | 6025719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 432818 |
|---|
| End bp | 434698 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641593242 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716580 |
|---|
| Protein GI | 169830598 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.771372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTAAGG ATTTCTATGA CCAACTTGGG GACCTCAATC TTCTTCGGCG GGCGTGGCAC
TTGGCCCGGA ATGACGCTCG TACAGATTTT ATGTTTGACC CTTATCGGTA TTCCGATTTT
GCGTTTCGGC TCGATAATTA TCTACAAGGC ATTGCACACA GCTTGAGGAC TTACACCTAT
CACCCAAGAT CTCTACTGAC CATGGATATT CCAAAGTCGA GCCTTTCTGT GCGTCCAGGG
ACAGTTTTAT CTATTGAAGA CAAAATCGTG TTATTTGCCA TTGCTTGTCT TATCGCGCCA
CCGCTTGACA ATAAGCTTCC TGATTTTGTT TATTCGTGGC GTGTTAAGAA AGGAAAAAGT
AAAAAAGAAC TCTTCCGTGA CCACGAAATC CTCAAATTCC CGTTCTTGAA GAAATCAACC
ATTATTAAAC AGGTTGATTT CATCGAACCC TGGTACGAAG CATGGCCACT ATTCATACAA
GAGGTGAAAA TTGCTTACGA AGAGCAGGGC TTCAAGTACA TGGTTGTCTC TGATATTGTA
GCCTACTTTG AAAACATTGA TCTCAGATTA TTGCGTGATC TATTATTGCA TTACCTCCCG
CGTCAACCCC GTATCATTAA TTTTCTTATC AGTTTGCTTG AACATTGGAC TTGGCCAGTT
GTCCTTGGTG GTGCATCAGC AAGGGGCATC CCCCAGGGGA ATGGCGTAAG CAGTTTTTTG
GGGAATATTT ACCTGTTGCC CTTGGATACT GCGTTTCAAA CCTTTGCTAA GCGGCGGGAT
GTCAAATACC TCCGCTATAT AGATGATGTC AAGGTTCTGA CAAAAGATCT TCCTACGGCT
CGCGATGCTT TATTCTTAAT GAATGAAAAA CTTCGGGAAC TTCGTCTTAA TATCCAAGGA
GCGAAAACAC GCATTCTCGA AGAAGATAAA GAGATTCGCC AGGAATTCTT TGATCCCCGA
TTGGAGGCAG TAAATGACGT CATCGAACAG ATCAAAAAGA AATCCACATT GACTGCTCAG
GAACGAAAAG ATTTCGCTGA GGAGCTTAAC AGACAACTGA AAAAGGTGAA AGGCCGCAAG
AGCCTTATCC AAAAGAACGA GTTGCGCCTA TTCAGACGAT TGATAACCGG ATACACGCTT
CTCAAGTGTG GTCGTATGGT TGATATCGTG CTGAAACAGA TGGAGAAGAA CCCGGACGCG
AGGTTACTAA ACAGCGCGGT CCGCTATTTT CGTTTTCAAG AACGCAACTT CAAAAAGATT
GCGGGGACAT TATTTGACTT TATAAGCCAG GACAAGCTTC TTTTCCCATA TCAGAAAGCA
CACTGCTTTA TGGCGTTACG GTATCAGCGT GATCTTCCCT CCGAGGTGTG GAAAGAGGCA
AAACAAAGGC TTCGATCAAA GAAGGAGCAT TGGTACGTTC GCCAGCAAGC AGCGATTCTT
GTGGGTTTGA AACAGTTAAG TAAGCGAGAA CTCAGGTCTC TACGGAAACT TTACAACGAA
GTGGATAACA GAGAAGTTAA GAGGACCTTG ATGCAAAGCC TTGCTCAATT ACCATGCGAG
GATTTGACCA AGTTGGCGAA TGAACTTTTG TATGATAGTG ATGCAAAAAT GCAGCGACTT
GGCCGCTTTT ATTTCGGCCT TTTACATGAT GATGAAGTCG GTACCCAAAA ACAAATTAAT
TCACTTTTCG ACGATTTTCA GGAAGAGATC CTGATCGACA GAATCTTTGA AGTGGAAGTT
ATTTCAAAAG CAGGAAAGCG AACTACAAGA CAATATCTTC TGCAAAAACT CAAGAACGTG
CAAAATAATA TCCGCCGTCC TCTTTTGAAG ACAAGAGTTG ATTCAATTAT CTCACGGTTG
GAGAAGGAGA TCGAAGCATG A
|
|---|
| Protein sequence | MVKDFYDQLG DLNLLRRAWH LARNDARTDF MFDPYRYSDF AFRLDNYLQG IAHSLRTYTY
HPRSLLTMDI PKSSLSVRPG TVLSIEDKIV LFAIACLIAP PLDNKLPDFV YSWRVKKGKS
KKELFRDHEI LKFPFLKKST IIKQVDFIEP WYEAWPLFIQ EVKIAYEEQG FKYMVVSDIV
AYFENIDLRL LRDLLLHYLP RQPRIINFLI SLLEHWTWPV VLGGASARGI PQGNGVSSFL
GNIYLLPLDT AFQTFAKRRD VKYLRYIDDV KVLTKDLPTA RDALFLMNEK LRELRLNIQG
AKTRILEEDK EIRQEFFDPR LEAVNDVIEQ IKKKSTLTAQ ERKDFAEELN RQLKKVKGRK
SLIQKNELRL FRRLITGYTL LKCGRMVDIV LKQMEKNPDA RLLNSAVRYF RFQERNFKKI
AGTLFDFISQ DKLLFPYQKA HCFMALRYQR DLPSEVWKEA KQRLRSKKEH WYVRQQAAIL
VGLKQLSKRE LRSLRKLYNE VDNREVKRTL MQSLAQLPCE DLTKLANELL YDSDAKMQRL
GRFYFGLLHD DEVGTQKQIN SLFDDFQEEI LIDRIFEVEV ISKAGKRTTR QYLLQKLKNV
QNNIRRPLLK TRVDSIISRL EKEIEA
|
|---|
| |