Gene Daud_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0389 
Symbol 
ID6025680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp420237 
End bp421202 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content64% 
IMG OID641593237 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001716575 
Protein GI169830593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTGA GCCTCCTGGA GGTAAGGGAT CTGGTTAAGC ACTACCCGGG GAAAGGAGGG 
ATTCTGGCTG GCCGCCGGGA AAAGGTGCGG GCGGTGGACG GCGTATCTTT CTCCTTGGCC 
CGGGGAGAGA CCCTTGGCCT GGTGGGGGAG AGCGGCTGCG GCAAGAGCAC CCTGGGGCGG 
CTGGTGGTAC GGCTCGAAGA ACCAACGGCC GGAAAAATCC TTTTTGCCGG CGAGGAGACC 
ACCGGCCGGA CGGAGGGAAA GCTGCGGGAA CTGCGCCGCC ACTTCCAGAT CATCTTCCAG 
GACTCTTCTT CCTCTCTCAA TCCGCGCCGC ACGGTGGGAG CGACCATAGA GGAACCCCTG 
GCCAATTTCG GCGTGGCGAA AGAAGAGCGC CGGGAGCGGG TGGCTGAACT ATTAACGCTT 
GTCGGCCTGG AATCGGAGCA CGCCTCGCAT TACCCGCACG AATTCAGCGG GGGGCAGCGC 
CAGCGCATAA ACATCGCCCG GGCCCTGGCC CTGCAGCCGG AACTGGTGGT CTGCGACGAG 
CCGGTTTCCA GCCTGGACGT CTCCATCCGG GCGCAAGTTC TAAACCTTTT GCGGGAACTG 
AAAAGGCGGC TCAATCTTTC GTACCTCTTT ATCTCGCATG ACCTGGCCGC GGTGAATTAT 
CTTGCCGACC GGGTGGCGGT GATGTACCTG GGCAAAATCG TGGAGATTCT GCCGGCAGAA 
GGCCTCGTAT CACAGGCCCG CCACCCCTAC ACCCGGGCGC TCCTGCGGGC GGTGCCGGAG 
CCCGACCCGC GGCAAAAAAC CGGCCAAAAA CCGGTGGTGC GGGGCGAGCC GCCCGACCCG 
GGAAGGCCTC CTGCAGGCTG CCGCTTTCAC CCCCGCTGCC CCGAGGCCCG CGACCTTTGC 
CGGCAGGAGG AGCCTGCTTT AAAGGAGGTG AGAGAGGCGC ATTTGGTGGC GTGTCATTTA 
ATTTGA
 
Protein sequence
MRVSLLEVRD LVKHYPGKGG ILAGRREKVR AVDGVSFSLA RGETLGLVGE SGCGKSTLGR 
LVVRLEEPTA GKILFAGEET TGRTEGKLRE LRRHFQIIFQ DSSSSLNPRR TVGATIEEPL 
ANFGVAKEER RERVAELLTL VGLESEHASH YPHEFSGGQR QRINIARALA LQPELVVCDE 
PVSSLDVSIR AQVLNLLREL KRRLNLSYLF ISHDLAAVNY LADRVAVMYL GKIVEILPAE 
GLVSQARHPY TRALLRAVPE PDPRQKTGQK PVVRGEPPDP GRPPAGCRFH PRCPEARDLC 
RQEEPALKEV REAHLVACHL I