| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0380 |
|---|
| Symbol | |
|---|
| ID | 6026304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 406736 |
|---|
| End bp | 408358 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641593228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716566 |
|---|
| Protein GI | 169830584 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02677] conserved hypothetical protein TIGR02677 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC AAGTCCTGAA GCCCATCGCG GAAGTCTCTT ATCTTACCGT CGGGAACGCC
TGGCGTTACC GGGCCATCCT GCGCTATTTC TACGACCAGC ACGAACGCCT GCGCCACTAT
CTCTTCCCCG AGGAGGTCCT GGAGCATCTC CGGCGAAGCC CGTATTTTCA CGATTACACC
GAGGAGCAAC TGCAGCAGGA TCTGGCCCAG TTGGTGGAGT GGAAGAACCT GGTCCCTCGT
CAGGACACCG GCAGGGTGAC TTCCATCGAG GAGTTCAAGA AAAAGAGGTT TCGTTACCAG
GCGACCCCGT ACACCATCGA GATCGAACGG ATGGTACAGC AGCTGGAACA GATGGGGGAG
TCGTTCGGCG GCTCCCTGGA GAAGACCCTT TTCGACCGCC TGCTGGCCTC GCTGAAGCGG
CTGGTGGCGG AGGACGAGAG TGCCCGGCCG GCGCGCGCTG TTGACGGCAT CGCCGCCGGC
GGAGCCCAGG CGCGTGACCT GGATTCCGGG CCGGGGCACG GCGGAGACGG TTCCGGCTCC
TACCGGACGC ACGGCCGCGA CGGCTCCGGC CGGGCGTACG CCGCGGACGG CTTCACCGGC
GAGGAACTGA ACGCCCTGTG GCGCGACACC TACGAGAGCT TCCGCAAGCT GACCGAGAAC
GCCACCGACT ATCTGGCCCA CCTGCAAAGC GAACGTGTCG AAGAGTTGAT GATGACGGAA
GCCTTTTTGA CCTATAAAGA GGCTATCACC CAATACCTGC GCGATTTCAT GACCGTGCTG
CAGCGGACCT CGCTGCAGAT TGAGACGGTG CTGAGGGGGA CCCCGCCCAG CCTGATCGAA
CGAGTGGCCG GGCGCCTGGC CGACTACCAC CTGAGCATTC CCCGCCTGGA GGAAACGCGG
ACCCGGGAAG AGCTGGCGCA AAGACACCTG GTCCAGTGGC AGGCCCTGCG GGACTGGTTC
TTGGGCGGCG CCGGCCGGGA GAGTGACCTC GTCTACCTGC AGAACGCCAC CAACGAGACC
ATCCGCCGAA TCACCCGCTT CGCCCAGCGG CTGGGGGAGC GGCACCACAC CTTTCGCAGC
CGCAAGCGGG ACTACCTGCA CATCGCCGGA TGGTTCGCGG CCTGCGCCGA CCTCCGGGCG
GCGCACGAAC TGTCGGCGGT CGTGTTCGGC GCCTTTCACA CCCGCCACCT GTACGCCGCC
CCCAAGGAGA CCGAGGACAT CTACGCGGAG ATATGGGACC AGCCGTCCAT GGAAATTACG
CTGAGGCCCC GGGTGCGGGC GTACCGCGAG AAGACCAGGC CCAATGCCGC CGCCAGTCAC
ACGGACGAAA AGGCCCGGGT GGCGGCCGAG TACCTGCGGG AAAGGGAGGC CGAGCGGGCG
CTTATCGACC GGTTGATGAG CGGTGACCGG ATTGTGGTGG GGGAACTGCC GGTGATCGAG
CCCCACGTCC GCAAAACGCT TTTGTACTGG ATTACCAAGT GCATGGGCAG CCGGGACCGG
GTGGGGAAGA CGGAGACCGG CCGGTCCTTT CGCCTGGAAA AGATCGACGA CCGCGAGATA
GTCCTGCGTT CCCGGGACGG GAGTCTCACG ATGCCCAACT ACGTGCTGCA GTTCTATGGA
TAG
|
|---|
| Protein sequence | MDEQVLKPIA EVSYLTVGNA WRYRAILRYF YDQHERLRHY LFPEEVLEHL RRSPYFHDYT
EEQLQQDLAQ LVEWKNLVPR QDTGRVTSIE EFKKKRFRYQ ATPYTIEIER MVQQLEQMGE
SFGGSLEKTL FDRLLASLKR LVAEDESARP ARAVDGIAAG GAQARDLDSG PGHGGDGSGS
YRTHGRDGSG RAYAADGFTG EELNALWRDT YESFRKLTEN ATDYLAHLQS ERVEELMMTE
AFLTYKEAIT QYLRDFMTVL QRTSLQIETV LRGTPPSLIE RVAGRLADYH LSIPRLEETR
TREELAQRHL VQWQALRDWF LGGAGRESDL VYLQNATNET IRRITRFAQR LGERHHTFRS
RKRDYLHIAG WFAACADLRA AHELSAVVFG AFHTRHLYAA PKETEDIYAE IWDQPSMEIT
LRPRVRAYRE KTRPNAAASH TDEKARVAAE YLREREAERA LIDRLMSGDR IVVGELPVIE
PHVRKTLLYW ITKCMGSRDR VGKTETGRSF RLEKIDDREI VLRSRDGSLT MPNYVLQFYG
|
|---|
| |