Gene Daud_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0225 
Symbol 
ID6027260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp257681 
End bp258322 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID641593079 
Productribosomal protein L3 
Protein accessionYP_001716418 
Protein GI169830436 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGCTGA TGGCTAAGGG AATCCTTGGG CGCAAGCTGG GAATGAGCCG GTTCTTCACG 
GCGGAAGGGG TGGCCGTACC GGTGACGCTG ATCGAGGCCG GGCCGTGCAC CGTGGTCCAG 
AAAAAGACCC CGGACACCGA CGGGTACAGC GCCGTGCAGC TGGGTTTTAT GGAACAACCG 
GCGAAAAGAG TAAACCGGCC GCTGAAAGGG CACTTCGGCC GGGCCGGGGT GAAGCCGAGC 
CGGTTCTTGC GCGAGCTCCG CGTGGCAGAT GCTGCTGACT ACGAGGTCGG ACAGGTACTG 
AAAGCGGACC TTTTTGACGT CGGAGAAATC GTGGATGTGG TGGGCACCTC CAAGGGCAAA 
GGTTTTGCCG GGGGAATCAA GCGCCACGGT TTTCACCGGG GACCGATGGG TCACGGCTCC 
AAGTACCACC GCCGGCCGGG TGCGCTGGCG GCGAAGGGTC CGGCCCGCGT GTTCAAGGGC 
CGGAAACTCC CGGGGCGCCT GGGCGGCGTG CGGGTGACCG TTCAGAACCT GGAGATAGTG 
AAGGTGGACC CCGAGAGGAA TCTGCTGGCC GTGCGGGGCG CGGTCCCGGG AATCCGGGGC 
AGCCTGGTGG TGGTCAAAAG CGCGGTCAAA GGCAACGAAT AG
 
Protein sequence
MWLMAKGILG RKLGMSRFFT AEGVAVPVTL IEAGPCTVVQ KKTPDTDGYS AVQLGFMEQP 
AKRVNRPLKG HFGRAGVKPS RFLRELRVAD AADYEVGQVL KADLFDVGEI VDVVGTSKGK 
GFAGGIKRHG FHRGPMGHGS KYHRRPGALA AKGPARVFKG RKLPGRLGGV RVTVQNLEIV 
KVDPERNLLA VRGAVPGIRG SLVVVKSAVK GNE