Gene Daud_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0194 
Symbol 
ID6027604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp221615 
End bp223201 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content56% 
IMG OID641593051 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001716390 
Protein GI169830408 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00079509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCAGCA ACCTGTTCCA TATTTACCGC TCCGTGTCCG GTAACGAAGA TTACTTATGC 
AAAGTGATGG TCTTTGTGGC CGACCGACCT GGTTCATTGG CGGCGCTGGC TAGCATTTTC
GCCAGCCACA ACGTCAATAT CACCTCTTTT CACTATAACC GGTCGGAGCA TCCCAACCGG
GTGCTTGTCG AGGGAAAAAG TAACGACCTC CAGTCCTTAC AGAATGTTTG CCGGGAACTG
AACGAGCAAG GGATGCTCGA CGAAGAATCC CATGCGTCGG CCCTTGAACT TGGCGTGCTC
GATACCCAGA ACATTCTCAA ATTGAAGTGG CATCTCCAGC ACCGGCCGGG TTCGTTGGCA
GCATTCGCCG CCCTGCTCCG GAACCACGGG GCCAATGTCA TTTATATGGC ATATAACGAG
GCCGTTTCCG AGGTGACAGC TACAGTTTCC CTCGCTACCC GGAGTGCTCG GGAGATAGAT
GAGCTCCTGA AAGACCTCAA TGAACACGGG TATTATTACA GCCTAGAGTA CCAGGGCACG
GAGCAGGAAG AAACAGAAAA CGTCATCGGC CTCAATCTCG TAGAGCGGTT TTTTTTCAGG
CTGAAGCGGC TCCTGGGGAC GGAGGACATC GATCGCCTGA AGAAGGTCGT AGAGTCGTCC
CAGCGCATGT CCGAGGCGCT GGCCAGGTTT AACAGGGAGG CGGGCAAGAA TCTCGAAGCC
GGTAAGGTTT TCACTAATGT GCTGGCCTTC GCTTCAACAT CCCTGTGCAG GACCGGTCCC
GGTTTTTCCT ACCGGCGGCT CCCGGCGCTT CCCCTTGGAA GTATCGTCTT CCACGCCTTT
CGTCTTCCGA CCGGAGGGAA CATCTACATG CTGCAAAGTG ACGAAGAAGT GGTCATGGTA
GACGGCGGGT ACGGGGTTTA CTACGAAGAC GTAAAGCGGA TGTTGCGGGA GAACGGGTTG
GACCCCGCGC GTATACGTCG CATCTACCTT AGTCACGCCG ATGCGGATCA CGCGGGCTTG
AGCGGTTATT TCGCTTCCGA GTTCGGTAGC CGTGTCTTCC TCCACCCCGA TGCCTGCGGC
ATACTGGAAA ACGAAAACCG GGCGTGGGGG AGTGGTTCGC CGCTCGCCGG GTTGAACCAC
TACTTCACGG TGCTGGTTAA TACCTTTACG AAGTCTGCTG CGCCGTCCGC GTGGGAAGCG
TACGGCACCG GCGACCTCGG TCGCTTGAAC GGTCTCCGGG TTATCGACAC TTTCACAGTG
GGCGGCCAGA CCTTTAAAGT ACTGGAAAGC ATGGGCGGCC ATATTCCCGG CCAGGTTTTC
TTTATCGGTG TTGAATCGGG GCTCATTTTC ACGGGTGACT ACCTCATGCT CCTTGTGAGC
CTGGGGCCAG AGGAACGGGA ATTTCTTAAC CTGCCGAAGT TTATGATGAC AAGCACTAAC
ACCAACTCCC TTCTTTTCCG CCAGGAAATG CAGGCCCTGA AGGAGATCGT GCTTGGCCTT
GATGCCGAGT TGTACGAACG AAACCGCGGG GCGATTGTTG CGCCGGGCCA CGGCGATTAC
TACCCGGCCA GGTGGTTAAA CCGGTAG
 
Protein sequence
MCSNLFHIYR SVSGNEDYLC KVMVFVADRP GSLAALASIF ASHNVNITSF HYNRSEHPNR 
VLVEGKSNDL QSLQNVCREL NEQGMLDEES HASALELGVL DTQNILKLKW HLQHRPGSLA
AFAALLRNHG ANVIYMAYNE AVSEVTATVS LATRSAREID ELLKDLNEHG YYYSLEYQGT
EQEETENVIG LNLVERFFFR LKRLLGTEDI DRLKKVVESS QRMSEALARF NREAGKNLEA
GKVFTNVLAF ASTSLCRTGP GFSYRRLPAL PLGSIVFHAF RLPTGGNIYM LQSDEEVVMV
DGGYGVYYED VKRMLRENGL DPARIRRIYL SHADADHAGL SGYFASEFGS RVFLHPDACG
ILENENRAWG SGSPLAGLNH YFTVLVNTFT KSAAPSAWEA YGTGDLGRLN GLRVIDTFTV
GGQTFKVLES MGGHIPGQVF FIGVESGLIF TGDYLMLLVS LGPEEREFLN LPKFMMTSTN
TNSLLFRQEM QALKEIVLGL DAELYERNRG AIVAPGHGDY YPARWLNR