| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0117 |
|---|
| Symbol | |
|---|
| ID | 6025786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 126618 |
|---|
| End bp | 127538 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641592970 |
|---|
| Product | methylenetetrahydrofolate reductase |
|---|
| Protein accession | YP_001716317 |
|---|
| Protein GI | 169830335 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACAC CGAGCAATTT GCAGAGGGTG CTGGAACAGG GACATTTTGC GGTGACGGCC
GAAATCGGCC CGCCAAAGGG GGCGTCCGGG GAGACCGTAC GCCGGCACGC CGCCTTGCTC
CGGGACTGCA CGGACGCCCA GAACGTCACC GACAACCAGA GCGCGGTGGT GCACATGTGC
TCCCTGGCGG CCGCGGTGCA CGTGTTGCAG GCCGGGGGCG AGCCGGTGTT CCAGCTTACC
ACCCGCGATC GTAACCGCCT TGCTCTGCAA AGCGACCTGC TGGGTGCCGC CAGCCTGGGG
ATCAGGAATG TGCTCTGCCT TACCGGTGAC CACCAGAAGT TCGGCAACCA CCCCCAGGCA
CGGGGCGTCT TCGATCTGGA CTCGGTGCAG CTGGTGGGCC TGGCGCGCCG GCTGTGCGAG
GGCCGGTTTC TGAACGGGGA CGAGGTAAAG CCGCCGCCGG AGCTGTTCGT CGGTGCCGTG
GAGAACCCCT TCGCCGGCCC GCTGCCGCTG CGGGTGTTGC GGCTGGGGAA GAAAATCGCC
GCGGGGGCCC GCTTCATCCA GACGCAGGCG GTATACGACA TCGAGCTGTT CGCGCGTTTC
ATGGCCGCCG TCCGGGAACA GGGTTGGGAT AAGGAAGTCT CCATCCTGGC CGGGGTGGTG
CCGCCGAAGT CTGCGGGCGC CCTGAGGTAC ATCAGCAAGG TTCCCGGTAT GGTGGTGCCC
GACAAACTTA TTCGTCGCAT GAAGGGGGCC GCGGACCAGG CGCGGGAGGG GAAACGGTTC
GCCGTCGAGC TGATCCGGCA CCTGCGCACG ATCAAGGGCG TTCGCGGCGT CCACATTATG
GCCATCAGGT GGGAGGAGGC GGTGCCGGAG ATCGTCACCG AAGCGGGACT GCTCCCCAGG
CCGCATGCCG ATAAGTATTA A
|
|---|
| Protein sequence | MTTPSNLQRV LEQGHFAVTA EIGPPKGASG ETVRRHAALL RDCTDAQNVT DNQSAVVHMC
SLAAAVHVLQ AGGEPVFQLT TRDRNRLALQ SDLLGAASLG IRNVLCLTGD HQKFGNHPQA
RGVFDLDSVQ LVGLARRLCE GRFLNGDEVK PPPELFVGAV ENPFAGPLPL RVLRLGKKIA
AGARFIQTQA VYDIELFARF MAAVREQGWD KEVSILAGVV PPKSAGALRY ISKVPGMVVP
DKLIRRMKGA ADQAREGKRF AVELIRHLRT IKGVRGVHIM AIRWEEAVPE IVTEAGLLPR
PHADKY
|
|---|
| |