| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4132 |
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| Symbol | |
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| ID | 3566632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4430201 |
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| End bp | 4432129 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637682604 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_287328 |
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| Protein GI | 71909741 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC ACGTCCTCCT CGCCAGCCTT GTGCTTTCGT CTTCCCTGTT CGCCCAAGTC
AACGACACAG CCTTCCTGAC CGCCCGTGAC GCCTTCCGGG CCGGCGACAT CAACAAGCTG
GAGCGCGCCA TAGGCCAGCT CGGCAACCAC GAGCTGGCAC CGTATGCCGA GAGCTACCGC
CTGCGCATGT GGATGGACAA GGGCGACCCG AACAACCTGC GCGACTTCCT GCAGCGCAAC
GATGGCAGCT ACGTGGCCGA AAAGCTGCGC GCCGACTGGA TTCGTTTTCT CGGCAAGCGT
TCCGCCTGGA ACGAGGTGGA AAGCGAATTT CCCAAGCTGC TCGCCCCCGA ACCCGATGTC
ACCTGCTACA ACCAGCAAGC CCGACTGGCT CATGATGACC GCAGCGTGCT GGCCGAAGCC
GAGAAACTCT GGCTGACCAT GCTTGAACCG CCGGAACCCT GCCGGCCGAT TCTTGATGCG
CTGGTCGCCA GCCAGAAAAT GACTGCCGAC GATGTCTGGG CCCGCGCCCG TCGCCAGCTG
GAAGCCAATC GCCCCAGCTG GACAAAAACC ACTTTGAATT ACCTGCCGGA CAGCCAGATG
CCGGACAGCC GCTCGCTCGA CAGCGCGATC AGCAGTGCGA TGAGCTATCT TGTCCGCCAG
CCGGCCAACT GGAACAGCAA CCGGGCAGGG CGTGAACTCG CCGCCTTTGC CATCCAGCGC
CTGGCGGTCA ACGACCCGCG CGTTGCTGCC GACGAACTGG AAAAGATCAA AAGCAAATTG
CAGGACTCCG AGCGTCAGTG GGCCTGGAGC CAGATCGCCC TGCAGGGTGC CAAGAAGCAC
ATGACCGAAG CCAGTGGCTG GTACGCCAGC GCCGGCAAGA CACCGTTGTC GGATGAAGTC
GCCCAGTGGA AAGTTCGCGC CGCCTTGCGC GCCCAGGAGT GGGGTACTGT CCGCGACACC
ATCCAGGCCA TGCCGCCCGC TTTGGCTGCG CAGCCGGAAT GGATTTACTG GCTTGGCCGT
TCCCTGCATG CCGGCGGACG GACAACCGAA GGCAACGCCC TGTTCGAAAA GATCGCCGGC
CAAGCCAGTT TCTACGGCAA CCTGGCCGAT GAAGAACTCG GCCGCACGGT AGCGCCGCCG
CCCAAGGCCA AGGCCACCAC CGCCGAAGAG CAAAAAGCCG CCCAGGATAA TCCGGGCATC
CGCCGCGCCC TGGCCTTCTT CCGTGTTGAT CTGCGAACCG AAGCGGTCAA GGAGTGGAAC
TGGGCACTGC GTGGGATGGA AGATCGCGAA CTGCTCGCCG TGGCCAATCT CGCCAAGCGC
AACCAGATCT GGGACCGCGC CATCAACACG GCCGACCGGA CCAAGAACGA ACACGATTTC
ACGCTGCGCT TCCTCTCGCC CTACGGTGAG ACGGTTCGGC CCGCAGCCCA GAACCAGTCG
CTGGACGATG CCTGGGTCTA TGGTCTGATG CGTCAGGAGA GCCGTTTCAT TACCAGCGCC
AAATCCAATG TCGGCGCTTC CGGCCTGATG CAGCTGATGC CGGCGACCGC CAAATGGGTG
GCCAAGAAGA TCGGCCTGCG CGACTTCAGC CATGGTCGCG TCAATGACAC CGAAACCAAT
GTGCTGCTCG GCACCAGCTA CATGCGACTG GTCATGGAAA ACCTCGACAA CCACCCGGTG
CTGGCTTCCG CCGCCTACAA CGCCGGCCCC GGCCGAGCCA AGAAATGGCG CGCTGACCGA
CCGCTGGAAG GCGCCATCTA CGCCGAAACC ATTCCGTTCA GCGAAACCCG GGACTACGTC
AAAAAGGTCA TGAGCAATGC GGTTTATTAT TCGGCCATCT TCAACGGCAA GCCCGATTCG
TTGAAGGCTC GTCTCGGTAC CGTCGGAGCG AAAACCTCCG ATACCATGAA AGATGCTGAT
CTTCCTTGA
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| Protein sequence | MKFHVLLASL VLSSSLFAQV NDTAFLTARD AFRAGDINKL ERAIGQLGNH ELAPYAESYR
LRMWMDKGDP NNLRDFLQRN DGSYVAEKLR ADWIRFLGKR SAWNEVESEF PKLLAPEPDV
TCYNQQARLA HDDRSVLAEA EKLWLTMLEP PEPCRPILDA LVASQKMTAD DVWARARRQL
EANRPSWTKT TLNYLPDSQM PDSRSLDSAI SSAMSYLVRQ PANWNSNRAG RELAAFAIQR
LAVNDPRVAA DELEKIKSKL QDSERQWAWS QIALQGAKKH MTEASGWYAS AGKTPLSDEV
AQWKVRAALR AQEWGTVRDT IQAMPPALAA QPEWIYWLGR SLHAGGRTTE GNALFEKIAG
QASFYGNLAD EELGRTVAPP PKAKATTAEE QKAAQDNPGI RRALAFFRVD LRTEAVKEWN
WALRGMEDRE LLAVANLAKR NQIWDRAINT ADRTKNEHDF TLRFLSPYGE TVRPAAQNQS
LDDAWVYGLM RQESRFITSA KSNVGASGLM QLMPATAKWV AKKIGLRDFS HGRVNDTETN
VLLGTSYMRL VMENLDNHPV LASAAYNAGP GRAKKWRADR PLEGAIYAET IPFSETRDYV
KKVMSNAVYY SAIFNGKPDS LKARLGTVGA KTSDTMKDAD LP
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