Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4023 |
Symbol | |
ID | 3567195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4321875 |
End bp | 4322900 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637682496 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_287220 |
Protein GI | 71909633 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.000715692 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAA TCCGGCGCAA TATCCTGAAA GGCATGGTTG CCACACCGGC TTTGGCCCTG TCGCCCAATC TGCTGTGGGC GCAAGCGGCT GGCGAGTTGA AAATTTCGCA CCAGTTCCCT GGTGGCACCG CGACCGAAGG CGATTTCCGC GACCGACTCT GTCGCCGCTT CAGCGCCGAA ATTACCAAGC GAACCAATGG CGCCTTGAGG GGCACGGTTT ATCCCGGATC GTCGTTGATG AAGACCAACG CCCAGTTCAG TTCGGTACGC AAAGGCGCGC TCGACATGAC GCTGGTGCCG CTCTCCTATG CCGGCGGCGA AGTGCCGGAA ACCAACATCG GGCTGATGCC GGGCATCGTC ACTTCCTACG AGCAGGCAGT GAGCTGGAAG AAAGCCGAGA TCGGCAAGGC GCTGGCCAAT ATCCTCGCCG ACAAGGGCGT GCTGGTTGTC AGCTGGATCT GGCAGGCCGG CGGCGTCGCC AGTCGGGTCA AGCCGATCAT CGATCCGGAA GATGCCAAGG GCCTGAAAGT CCGCGGCGGC AGCCGCGAGA TGGACATGGT GCTGAAGCAG GCCGGCGCCA CGGTGCTGAC CCTGCCGTCG AACGAAATCT ACGCCGCGAT GCAGACCGGC GCGCTGGATG CCGCGATGAC CTCGTCGACC AGCCTGATTT CCTTCCGTCT CGAAGAAGTC GGCAAGGCGC TGACCACCGG CCGCGGCAAG ACTTACTGGT TCATGTTCGA ACCCTTGCTG ATCTCCCGTG CGGTCTTCGA GAAACTGCCC AAGGCGCAGC AGGATGCGAT CATGGCGGTT GGTGCCGAGA TGGAGGCTTA CGCGCTGGAA GGGGCCAGGG CCGATGACCA GGCCGTGGCG GCGGTTTACC AGAAAGCCGG CGGCAAGGCT TACGACCTGT CCGACGCCTC GGTCAAGAAA TGGCAGGCGA TTGCCCGCGA TACCGCCTGG AAGGACTTCG CGGCCAAGAA TGAGAGCTGC GCCCGTATCC TCAAACTGGC CGAGGCCACG CTGTGA
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Protein sequence | MNEIRRNILK GMVATPALAL SPNLLWAQAA GELKISHQFP GGTATEGDFR DRLCRRFSAE ITKRTNGALR GTVYPGSSLM KTNAQFSSVR KGALDMTLVP LSYAGGEVPE TNIGLMPGIV TSYEQAVSWK KAEIGKALAN ILADKGVLVV SWIWQAGGVA SRVKPIIDPE DAKGLKVRGG SREMDMVLKQ AGATVLTLPS NEIYAAMQTG ALDAAMTSST SLISFRLEEV GKALTTGRGK TYWFMFEPLL ISRAVFEKLP KAQQDAIMAV GAEMEAYALE GARADDQAVA AVYQKAGGKA YDLSDASVKK WQAIARDTAW KDFAAKNESC ARILKLAEAT L
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