| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3961 |
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| Symbol | |
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| ID | 3567460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4258453 |
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| End bp | 4259454 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637682434 |
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| Product | uptake hydrogenase accessory protein hupU |
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| Protein accession | YP_287158 |
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| Protein GI | 71909571 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 0.462451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGC TTTGGCTGCA GAGCGGCGGC TGCGGCGGTT GCACGCAGTC CATGCTGTGC
TCCGAGCCTC GTTCGCTGTT CGACGAACTG CGCGACGCCG GTATCGAGTT TCTCTGGCAC
CCGGCGCTGT CGGTCGAAAG CGGCGAGGAA GCACTAAGCA TTCTCGAAGA CTGTGCCGAA
GGTCGCTTGG CCTTCGATGC GCTGTGTATC GAAGGTGCCA TGCTGCGCGG TCCGAATGGA
ACCGGCAAAT TTCACCTGAT GGCCGGTAGC GGCCGGCCGC TGACTGAATG GGTCGAGCGT
CTGGCCCGTC ACGCCAAATG GGTCTTTGCG ATTGGCTCGT GCACAGCCTA TGGCGGCTTT
TCGGCCAACA CGCCGGGCAA TCCGCTGGAA GCCTGTGGCC TGCAATTCGA CGAACAGACG
CCAGGTGGCC TGCTCGGCGC TGGCTTCCAG TCCTCCGCCG AGCTGCCGGT GATCAACATT
GCCGGTTGCC CGACGCATCC CGGCTGGGTG GTCGATACGC TGGAAAAGGC TGCGCTGGAA
GGTATAAGGG CCGATGACCT TGATGAATTC GGCCGGCCAT TGCTTTACGC CGGTGGCCTG
GTGCACCACG GTTGCGCTCG CAACGAATAT TACGAATTCA AGGCCAGTGC CGAGAAGCAG
TCCGATCTTG GCTGTCTGAT GGAAAACCTT GGCTGCAAGG GCACCCAGGC TCACGCCGAC
TGCAACCTGC GGCCGTGGAA CGGCAGCGGC TCCTGCCTGC GTGGCGGCTT TGCTTGCATA
GCCTGCACCG AGCCGGGTTT CGAATCGCCC GGTCATGCCT TCCAGGAAAC GCCCAAGCTG
GCCGGCATCC CGATCGGCCT GCCGACCGAC ATGCCGAAAG CCTGGTTCGT CGCGCTGGCT
GCGCTCTCCA AGTCGGCCAC CCCCAAGCGG GTGCGCAACA ACTCGGTGGC TGACCACCCG
GTGGTTCTTC CGGCGATTCG CAAGAAGGGC GGCGGCAAAT GA
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| Protein sequence | MKVLWLQSGG CGGCTQSMLC SEPRSLFDEL RDAGIEFLWH PALSVESGEE ALSILEDCAE
GRLAFDALCI EGAMLRGPNG TGKFHLMAGS GRPLTEWVER LARHAKWVFA IGSCTAYGGF
SANTPGNPLE ACGLQFDEQT PGGLLGAGFQ SSAELPVINI AGCPTHPGWV VDTLEKAALE
GIRADDLDEF GRPLLYAGGL VHHGCARNEY YEFKASAEKQ SDLGCLMENL GCKGTQAHAD
CNLRPWNGSG SCLRGGFACI ACTEPGFESP GHAFQETPKL AGIPIGLPTD MPKAWFVALA
ALSKSATPKR VRNNSVADHP VVLPAIRKKG GGK
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