Gene Daro_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3955 
Symbol 
ID3567493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4252285 
End bp4253439 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content52% 
IMG OID637682429 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_287153 
Protein GI71909566 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA TAGCCCCATA CGAACCGCAA AGCCTGCCGA TTGACGATCT AGATTATCGA 
GCATTGATCG CTTTGGTTGG CGAGGCAAAT GCAGCATTGG CTCGCTATAG CGGCCTACTT
CAGGGAATGG TAAACCCAGC CGTCCTTCTG TCACCAATAA CGAACCAGGA AGCCGTTCTA
TCCTCAAAAA TTGAGGGAAC GCAGGCAACT CTCGAAGAGG TTCTGGAGCA CGAAGCTGGG
CAAACCCACG ACGAGAACAA GACTCAGGAT ATTCGGGAAG TACTCAATTA CCGGAAGGCG
TTGATGCTTG CCCAGGAACA ACTACAGGGG AGGCCTCTTC GGCTCAGTTT GTTGCTGCAT
CTGCACACTA TCTTGATGGA CAGCGTTCGA GGGCAGAACA AAACGCCAGG CGAGTTTCGC
AAAGAGCAAA ACTGGATTGG CAGAACGGGC TGCTCGATGG AGGAAGCCAG CTTCATTCCC
CCCAGCCCGC TGCGCCTGCA TGATCACCTA CAGGCATGGG AAACCTATCT CTCAAGCACG
GACTTTGATG TCCTAGCACA AACCGCCATT GCCCATGCTC AATTTGAACT GATCCACCCA
TTCAAGGATG GCAATGGACG TATCGGACGG CTATTGATTC CCTTGTTGCT TTACGCGAAG
GGGCGTCTAT TCAGCCCCAT GTTCTACCTG AGTGCTTACC TGGAGAGCAA CCGGGATGAG
TACTATGCAA GGCTTAAAGC GATCTCGAAA GAGGGGGATT GGACCGGTTG GATCGCGTTT
TTCCTGAGAG CTATCATCGA GCAAGCAACG GACAACACTG CCCGAGTCCA GCACATCATG
TCCTTGTACG ACACGATGAA AGATCGAGTT CGGGCCGTCA CACATTCTCA GCACACCGCC
CAGCTGGTTG ACCTTCTGTT CGCCAAGCCA ATTTTCCGCT CCTCAGACAT CATTGAAAAA
TCAGAAATAC CGAAGCCGAC CGCCCACTTG TTGATTCGCC AACTGCAAGA GGATGGAATT
ATCAAGGTGA TGCGCCAAGC ATCGGGCAGA CGACCAGCAA TCTATGTATT CCCGCGACTA
CTCGATATTG CCGAAGGAAG AATTGACCTA TCCCCCCCCA AAGGATCAGA ACCAGTTCAG
GGAGAGCTTC TATAG
 
Protein sequence
MTTIAPYEPQ SLPIDDLDYR ALIALVGEAN AALARYSGLL QGMVNPAVLL SPITNQEAVL 
SSKIEGTQAT LEEVLEHEAG QTHDENKTQD IREVLNYRKA LMLAQEQLQG RPLRLSLLLH
LHTILMDSVR GQNKTPGEFR KEQNWIGRTG CSMEEASFIP PSPLRLHDHL QAWETYLSST
DFDVLAQTAI AHAQFELIHP FKDGNGRIGR LLIPLLLYAK GRLFSPMFYL SAYLESNRDE
YYARLKAISK EGDWTGWIAF FLRAIIEQAT DNTARVQHIM SLYDTMKDRV RAVTHSQHTA
QLVDLLFAKP IFRSSDIIEK SEIPKPTAHL LIRQLQEDGI IKVMRQASGR RPAIYVFPRL
LDIAEGRIDL SPPKGSEPVQ GELL