| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3909 |
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| Symbol | |
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| ID | 3567697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4204259 |
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| End bp | 4206172 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637682383 |
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| Product | ribonuclease II |
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| Protein accession | YP_287107 |
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| Protein GI | 71909520 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAT TGTTTGAAGA AGATGGCGGC TTTAAGGCCG GCAGCATCAT GGCCGACAAC
GATAGCTCGT TGCAGGTCGA AATGCCCTCC GGCAAGCGCA GCAAGATCAA GGCCGCAACG
GTATTGTTGC GCTTTGAAAA GCCCTCTGCG GCTGCCTTGC TCGATCAGGC TACGCCGCTG
GCCGAAGAGA TCGAAGCTGA ATTCCTGTGG GAGTGCGCAA GCGATGGCGA ATTTTCGTTT
CTTGATTTTG CCCGTGATTA CTACGGACAC GAACCCGCGC CGATCGAAGC GACGGCGGTG
CTGCTTGCCC TGCACGCCGC GCCCGTCTAT TTCCACCGCA AAGGCAAGGG CCGCTTCCGC
AAAGCGCCTG CCGACATTCT CGCAGCTGCT CTGGCCAGTC TTGAAAAAAA GCGTCAGCAA
GCGCTCACGA TGGAAGGCTG GATTGGCGAG CTGAGAGAGT TCCGCTTGCC GCCGGAAATT
GGCTTGCTGA CCGATGCGCT GCTCTATGCA CCGGATCGCA ACAAACCGGA AACCAAGGCC
TTTGAAACCG CCTGCGCCGA AGCGGGCCTG ACGGCGGCGC AAATGCTCTT CAAGTGCGGT
GCCATCAAGT CGCCGTACTT CCTGCATTAC CGTCGTTTCC TGCACGAACA ATTCCCCAAG
GGCACGGCTT TCCCGGCGCT TGATGCGCCA AAGCTCCCGA GCGATCTGCC GCGCGCCGAC
GTCCGGGCTT TCTCGATCGA TGATGCCAAC ACCACCGAGA TCGACGATGC ACTATCGGTC
GTCAAGCTGC CCGGCATCGG CTCGCGGATC GGCATCCACA TCGCTGCACC GGGGCTGGCC
ATCGAGCATG GTTCGCCACT TGACGGCATC GCCCGCGCCC GGTTGTCGAC GGTTTACATG
CCGGGCAACA AGATCACCAT GCTGCCCGAT GCCGTGGTCC AGAACTACAC GCTGGCCGGT
GGTGTCGATT GCCCGGCCGT GTCGCTGTAC CTGACGGTCA ATGAATCGCT GGAAATTCTC
AGCCACGAGT CGCGGCTGGA AATGGTGCAT ATCGCTGCCA ACCTGCGCCA CCATGAAATC
GAACCGTGGT TCAATGCCGA AACCATAGCC GGCCCGCTGC CCGACCAGCC ATTCAAGGAC
GAGCTGGTTC ACTTGTGGCA CTTTGCCAAT GCCTGCGAAG GCCGGCGCGG AAAACCGTCG
GCCATGCAGG GCATCAACGA CTACAACTTC GAAATCGTTG GTGATCTGGC CGATCCGGAT
GCCTGTTCCG TCGAGATTAG CGAACGCAAG CGCGGCAGTC CGCTCGACAA GCTGGTCGCC
GAGTTGATGA TTGTTGCCAA TTCGACCTGG GGCGGCCTGC TCGCTGAAAA GAATATTGCC
TGCCTGTACC GTGCCCAGAC GCAGGGCAAG GTGCGCATGA CGACTTCGCC GCTGCCGCAT
GAAGGCCTGG GCGTGCCGCA ATATGCGTGG ATGACCTCGC CGCTGCGTCG TTATTGCGAC
ATGGTCAACC AATGGCAGCT GATCGCCTGT TTGAAAGGCG AAACCCCGGC TTTTGCCCAG
AAATCGGCCG AATTGTTCGG CGCCATGCGT GATTTTGAGG TCACCTACGC AGCTTATGCC
GATTTTCAGC GCCAGATGGA GCGTTACTGG TGCCTGCGCT GGATTCAGCA GCGCGGCTTG
ACTGAAATCG ATGCGACCCT GCGCCGAGAA CAGAGCGTCA AGCTTGACCA TTTGCCGCTG
CTGCTGCGGG TGCCTTCAAT TCCGTCCGAC CTGTCGCCGG GGCAGCGCAT TCGTCTGGCA
GTCGAGAGCC TTGATTTGCT GGCACCGGAA ATTACCTGCC GTTTCCTTAA TCTGCTTGGC
GAAAGCGACG CTGCGGAAGT CGCGGAGGAA GCCGAAGAGG GAGAGGGCGC GTGA
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| Protein sequence | MNVLFEEDGG FKAGSIMADN DSSLQVEMPS GKRSKIKAAT VLLRFEKPSA AALLDQATPL
AEEIEAEFLW ECASDGEFSF LDFARDYYGH EPAPIEATAV LLALHAAPVY FHRKGKGRFR
KAPADILAAA LASLEKKRQQ ALTMEGWIGE LREFRLPPEI GLLTDALLYA PDRNKPETKA
FETACAEAGL TAAQMLFKCG AIKSPYFLHY RRFLHEQFPK GTAFPALDAP KLPSDLPRAD
VRAFSIDDAN TTEIDDALSV VKLPGIGSRI GIHIAAPGLA IEHGSPLDGI ARARLSTVYM
PGNKITMLPD AVVQNYTLAG GVDCPAVSLY LTVNESLEIL SHESRLEMVH IAANLRHHEI
EPWFNAETIA GPLPDQPFKD ELVHLWHFAN ACEGRRGKPS AMQGINDYNF EIVGDLADPD
ACSVEISERK RGSPLDKLVA ELMIVANSTW GGLLAEKNIA CLYRAQTQGK VRMTTSPLPH
EGLGVPQYAW MTSPLRRYCD MVNQWQLIAC LKGETPAFAQ KSAELFGAMR DFEVTYAAYA
DFQRQMERYW CLRWIQQRGL TEIDATLRRE QSVKLDHLPL LLRVPSIPSD LSPGQRIRLA
VESLDLLAPE ITCRFLNLLG ESDAAEVAEE AEEGEGA
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