Gene Daro_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3892 
Symbol 
ID3567737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4183231 
End bp4183671 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content58% 
IMG OID637682366 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_287090 
Protein GI71909503 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGACAG TGCTCGCCTT CGATTTCGGC GAAAAGCGTA TCGGTGTCGC CACCGGTGAA 
ACCATGCTCT GTTCCGCCCA CCCGCTGACC ACCATCCATG CTGAATCGAA CGAAGACCGA
TTTGCCGCGA TCGGCAAGCT GGTCGCCGAG TGGCAACCGG AACAACTGGT GGTCGGCCTG
CCGACCCATG CCGATGGAAC GCCGCATGAA ATGACCCGCT TGGCGACAAA ATTTGGCGAA
CGACTGGCCA GACGCTTCAA TTTGCCGGTT TCCTTTGCCG ATGAGCGTCT GACTTCGCTG
GATGCCGAAG CACGCCTGCG TGAAACCGGC CGCAATAGTA AATCAGCCAA GCCGCTGCTT
GATGCAGTAG CGGCTCAACT TATCCTTCAA ACCTGGTTCG AAAGCCCGCA CCATGTCATC
CCTACCCAAC CCTCTGCCTG A
 
Protein sequence
MGTVLAFDFG EKRIGVATGE TMLCSAHPLT TIHAESNEDR FAAIGKLVAE WQPEQLVVGL 
PTHADGTPHE MTRLATKFGE RLARRFNLPV SFADERLTSL DAEARLRETG RNSKSAKPLL
DAVAAQLILQ TWFESPHHVI PTQPSA