Gene Daro_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3614 
Symbol 
ID3567980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3880180 
End bp3882129 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content62% 
IMG OID637682087 
Productputative phage tail sheath protein FI 
Protein accessionYP_286813 
Protein GI71909226 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000782439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAACCT ACCGTACTCC GGATGTTTAC ATTGAGGAAA TTTCGGTCTT CCCGCCCTCG 
GTCGCCGAGG TGGAAACCGC GATCCCGGCC TTTGTCGGCT ACACCGCCAA CACCACGCTG
ATCTCCGCCG GCGATCTGCT CAATGTGCCG CGCCGCATCA AGTCCCTGCT CGAATTCGAG
GCCTATTACG GCAAGGGGCC GAGCTATACC GTGACGGCGG CCAATATCGA CGAAGCCGGC
AACTTCCTGA CAGCCGACAT CAGCAACAGC TATTTCATGT ACGACAGCCT GCGGTTGTTC
TACGACAACG GGGGCGGCGA CTGTTACATC GTCTCGGTCG GTGCCTACAA GACCAGCGGC
TCGCCAGTGC TGCGCGACGA GATCAAGGCT GGCGTGCAGG CCGTGGCCAA GGTCGATGAA
CCGACCATCC TGCTTTTCCC CGATGCTGCG ACACTGGGTG CCGACGATCT GGCCGCCGTG
CAGCAGGAAG CGTTGAAGCA ATGCGGCGAG CTGAAGGACC GCATGGCGGT GCTCGATCTG
CGCCAGGGCG ACCCGAACGG CGCCAGCTTC CGCGACAAGA TCGGCATCAA CAACCTGAAA
TACGGTGCCG CCTACACCCC CTGGCTGAAG CTCAACTACA ACAAGTCGGT TGGCTACGCG
CAGGTCAAGG ACAAGATTTT CAAGAACGGC ATTCAGGTGC CGCTCAAGGA TCTGACCACC
GAACCGCAAC TGCTCGCCGC CCTGACCGCG CTCGATGAAC TGACCGCCGA CAGCACGGCG
TTGGCCGCCG CCGTCAGCGC CTATGCCGGG CCCGGTGAAA CGCTGAGCAG CGCTTTCGCC
AAGAAACTGG CCATCTACAA GGGCAAGGCT GCGCCGGTAC CGGCCGATGC CGCACTGCTC
TTCGAATACG TTTTCGGCAT TGCCAAGCTG GTCGATGGCT TCGTCGATGC CTCGCCGCTG
AGCAACGCCA AGTTGGTCAC CGACATCAAC ACCATGATCG CCGGCACGCT GGCCCCCGCC
TTCTCCAGCC TGATCGCGCT GGAAAAGGAA ATGGCGGCCG ATATCGTGAC CGCCGGCGGC
GCCTATACCG TCGAATGGGA CCAGAACAAC CCGCCGGCCA CCGCCGCCTG GGGCGCCATC
TTCGGGGCCA GCGCTCCGCT TGCATCGAAC GGCAATACCG CCGGCGCGAC AGTCAAGGAC
GTGATGGACA GCGCCTTGCT CGGGCTGCAA AAGGGCTTTT CTGCCGCCAG CGGCGCGATT
GCCAGCATCG TTTCGGCCAT CGCCAACTAC CGCACTCTCA ACGAGCAGAC CCTGTTCGAG
AACTTCCTGC CCTACCGCAA TGTGATCAAC GGCATCGGCT CGACGCTGAC CCTGTGCCCG
CCGAGCGGCG CCATCGCCGG CATCTATGCC CTGGTCGACA ACCAGCGCGG TGTCTGGAAA
GCACCGGCCA ATGTCAGCCT GAACGGCGTC ATCGCCCCGG CCAGCAGCTT CACCACCAGC
GAAACCGATG CGCTGAATGT CGATGCCACC GGCGGCAAGT CGATCAACGC CATCCGCGCC
TTCGTCGGCA AGGGGACGCT GGTCTGGGGT GCCCGCACGC TGGCAGGCAA CGACAACGAA
TGGCGTTACA TCTCGGTCCG TCGCTTCTTC AACATGGTCG AGGAGTCGAT CAAGAAGTCG
ACCTACTGGG CTGTCTTCGA GCCGAACGAT GCCAATACCT GGGTCAAGGT CCGCGGCATG
ATCGAGAACT ACCTGACGCA GAAATGGCGC GAAGGCGCGC TGGCTGGCGC GGCACCGAAG
GATGCCTTCT TCGTGCGCTG TGGACTGGGC GTGACGATGA GCGCCCAGGA CATCCTGGAA
GGGCGGATGA ATGTCGAGAT CGGCATGGCG GTTGTCCGGC CGGCTGAATT CATCATCCTG
AAGTTCTCCC ACAAGCTGCA GACCAGCTGA
 
Protein sequence
MPTYRTPDVY IEEISVFPPS VAEVETAIPA FVGYTANTTL ISAGDLLNVP RRIKSLLEFE 
AYYGKGPSYT VTAANIDEAG NFLTADISNS YFMYDSLRLF YDNGGGDCYI VSVGAYKTSG
SPVLRDEIKA GVQAVAKVDE PTILLFPDAA TLGADDLAAV QQEALKQCGE LKDRMAVLDL
RQGDPNGASF RDKIGINNLK YGAAYTPWLK LNYNKSVGYA QVKDKIFKNG IQVPLKDLTT
EPQLLAALTA LDELTADSTA LAAAVSAYAG PGETLSSAFA KKLAIYKGKA APVPADAALL
FEYVFGIAKL VDGFVDASPL SNAKLVTDIN TMIAGTLAPA FSSLIALEKE MAADIVTAGG
AYTVEWDQNN PPATAAWGAI FGASAPLASN GNTAGATVKD VMDSALLGLQ KGFSAASGAI
ASIVSAIANY RTLNEQTLFE NFLPYRNVIN GIGSTLTLCP PSGAIAGIYA LVDNQRGVWK
APANVSLNGV IAPASSFTTS ETDALNVDAT GGKSINAIRA FVGKGTLVWG ARTLAGNDNE
WRYISVRRFF NMVEESIKKS TYWAVFEPND ANTWVKVRGM IENYLTQKWR EGALAGAAPK
DAFFVRCGLG VTMSAQDILE GRMNVEIGMA VVRPAEFIIL KFSHKLQTS