Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3614 |
Symbol | |
ID | 3567980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3880180 |
End bp | 3882129 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637682087 |
Product | putative phage tail sheath protein FI |
Protein accession | YP_286813 |
Protein GI | 71909226 |
COG category | [R] General function prediction only |
COG ID | [COG3497] Phage tail sheath protein FI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000782439 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAACCT ACCGTACTCC GGATGTTTAC ATTGAGGAAA TTTCGGTCTT CCCGCCCTCG GTCGCCGAGG TGGAAACCGC GATCCCGGCC TTTGTCGGCT ACACCGCCAA CACCACGCTG ATCTCCGCCG GCGATCTGCT CAATGTGCCG CGCCGCATCA AGTCCCTGCT CGAATTCGAG GCCTATTACG GCAAGGGGCC GAGCTATACC GTGACGGCGG CCAATATCGA CGAAGCCGGC AACTTCCTGA CAGCCGACAT CAGCAACAGC TATTTCATGT ACGACAGCCT GCGGTTGTTC TACGACAACG GGGGCGGCGA CTGTTACATC GTCTCGGTCG GTGCCTACAA GACCAGCGGC TCGCCAGTGC TGCGCGACGA GATCAAGGCT GGCGTGCAGG CCGTGGCCAA GGTCGATGAA CCGACCATCC TGCTTTTCCC CGATGCTGCG ACACTGGGTG CCGACGATCT GGCCGCCGTG CAGCAGGAAG CGTTGAAGCA ATGCGGCGAG CTGAAGGACC GCATGGCGGT GCTCGATCTG CGCCAGGGCG ACCCGAACGG CGCCAGCTTC CGCGACAAGA TCGGCATCAA CAACCTGAAA TACGGTGCCG CCTACACCCC CTGGCTGAAG CTCAACTACA ACAAGTCGGT TGGCTACGCG CAGGTCAAGG ACAAGATTTT CAAGAACGGC ATTCAGGTGC CGCTCAAGGA TCTGACCACC GAACCGCAAC TGCTCGCCGC CCTGACCGCG CTCGATGAAC TGACCGCCGA CAGCACGGCG TTGGCCGCCG CCGTCAGCGC CTATGCCGGG CCCGGTGAAA CGCTGAGCAG CGCTTTCGCC AAGAAACTGG CCATCTACAA GGGCAAGGCT GCGCCGGTAC CGGCCGATGC CGCACTGCTC TTCGAATACG TTTTCGGCAT TGCCAAGCTG GTCGATGGCT TCGTCGATGC CTCGCCGCTG AGCAACGCCA AGTTGGTCAC CGACATCAAC ACCATGATCG CCGGCACGCT GGCCCCCGCC TTCTCCAGCC TGATCGCGCT GGAAAAGGAA ATGGCGGCCG ATATCGTGAC CGCCGGCGGC GCCTATACCG TCGAATGGGA CCAGAACAAC CCGCCGGCCA CCGCCGCCTG GGGCGCCATC TTCGGGGCCA GCGCTCCGCT TGCATCGAAC GGCAATACCG CCGGCGCGAC AGTCAAGGAC GTGATGGACA GCGCCTTGCT CGGGCTGCAA AAGGGCTTTT CTGCCGCCAG CGGCGCGATT GCCAGCATCG TTTCGGCCAT CGCCAACTAC CGCACTCTCA ACGAGCAGAC CCTGTTCGAG AACTTCCTGC CCTACCGCAA TGTGATCAAC GGCATCGGCT CGACGCTGAC CCTGTGCCCG CCGAGCGGCG CCATCGCCGG CATCTATGCC CTGGTCGACA ACCAGCGCGG TGTCTGGAAA GCACCGGCCA ATGTCAGCCT GAACGGCGTC ATCGCCCCGG CCAGCAGCTT CACCACCAGC GAAACCGATG CGCTGAATGT CGATGCCACC GGCGGCAAGT CGATCAACGC CATCCGCGCC TTCGTCGGCA AGGGGACGCT GGTCTGGGGT GCCCGCACGC TGGCAGGCAA CGACAACGAA TGGCGTTACA TCTCGGTCCG TCGCTTCTTC AACATGGTCG AGGAGTCGAT CAAGAAGTCG ACCTACTGGG CTGTCTTCGA GCCGAACGAT GCCAATACCT GGGTCAAGGT CCGCGGCATG ATCGAGAACT ACCTGACGCA GAAATGGCGC GAAGGCGCGC TGGCTGGCGC GGCACCGAAG GATGCCTTCT TCGTGCGCTG TGGACTGGGC GTGACGATGA GCGCCCAGGA CATCCTGGAA GGGCGGATGA ATGTCGAGAT CGGCATGGCG GTTGTCCGGC CGGCTGAATT CATCATCCTG AAGTTCTCCC ACAAGCTGCA GACCAGCTGA
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Protein sequence | MPTYRTPDVY IEEISVFPPS VAEVETAIPA FVGYTANTTL ISAGDLLNVP RRIKSLLEFE AYYGKGPSYT VTAANIDEAG NFLTADISNS YFMYDSLRLF YDNGGGDCYI VSVGAYKTSG SPVLRDEIKA GVQAVAKVDE PTILLFPDAA TLGADDLAAV QQEALKQCGE LKDRMAVLDL RQGDPNGASF RDKIGINNLK YGAAYTPWLK LNYNKSVGYA QVKDKIFKNG IQVPLKDLTT EPQLLAALTA LDELTADSTA LAAAVSAYAG PGETLSSAFA KKLAIYKGKA APVPADAALL FEYVFGIAKL VDGFVDASPL SNAKLVTDIN TMIAGTLAPA FSSLIALEKE MAADIVTAGG AYTVEWDQNN PPATAAWGAI FGASAPLASN GNTAGATVKD VMDSALLGLQ KGFSAASGAI ASIVSAIANY RTLNEQTLFE NFLPYRNVIN GIGSTLTLCP PSGAIAGIYA LVDNQRGVWK APANVSLNGV IAPASSFTTS ETDALNVDAT GGKSINAIRA FVGKGTLVWG ARTLAGNDNE WRYISVRRFF NMVEESIKKS TYWAVFEPND ANTWVKVRGM IENYLTQKWR EGALAGAAPK DAFFVRCGLG VTMSAQDILE GRMNVEIGMA VVRPAEFIIL KFSHKLQTS
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