| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3609 |
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| Symbol | |
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| ID | 3568273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3876590 |
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| End bp | 3878314 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637682082 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_286808 |
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| Protein GI | 71909221 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000128418 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCGGAAA CCCGCGCCCT GCCCATCGCT GCCGAACATC GCGAATTCAC CGTCAAGGCC
GGTGGCCAGG CGGTGCCGCG CGAGCATCAG CTGCTCTCGG TCAGCGTCAC GGTCGCGGCC
AACCGCATAG CCTCGGCCCG GCTGGTCTAT GTCGATGGCG CCGCGTCGAC CGGGCAGTTT
CCGCTCAGCG ACGGTGACCT GTTCACGCCG GGGCAAAGCA TCGAAATCCT GGCCGGCGCC
GGGCGCGACA GCACCTCGGT GTTCATCGGC ACGGTCGTTC GCCAGGGCGC CCGGGTGCGG
GAAGCAGCCG CCTCGCAACT GGTCGTCGAT TGCAGGCACG CGGCAATGAA ACTGGCCGTC
ACCGAGCGGT CGACCGACCA TTTCGATAAA ACCGACAGCG ACATCATCGA AGCCGTGCTC
GGCGCGGCCG GTGTCGGCAC CGATGTCGAA GCGACCACGC TGCAACACAA GCAGGTCTTG
CAGTATCAGA GTACGGACTG GGATTTCATC CTTGCCCGGG CACGGGCCAA CGGCCAGCTG
GTCTGGTGCG AAGGCGACAA GGTAGTGCTC CGCAAACCGG CGCTGACTGG CGCCACGGTG
TGCACACTGC AGTACGGCGC GACGCTGCTC GAATTCGAAG GCGAAATCGA CGCCCGTCTG
CAGCACGGTG AATACAAGGG CACGAGCTGG GATGCAGCGA GCCAGGAGGC CGTTGAGGTG
CAGGCGGCAA TGCCGTCCTT TACGCCACCC GGCAACCTGA GCAGCGACGA CCTGGCCGGC
GTTGCCGATC AGGCTTTCGA TGTGCGCCAC CCGGGGCTGC CGGAAGCCGA AACGCAGGCC
TGGGTCGATG GCATCGCGCT GTATCGCCGG GTCGATCAGG TTTCCGGGCG CGGCAAGTGC
GAGGGCATCG CCACGGTCAA ACCCGGCGTG GTCGTCGAAC TGGCCGGTCT TGGCCGGCGC
TTCAACGGCA AGGTGCTGGT CACCGGCGTG CGCCATGAAT TCAGTCTGGT GCAGGGCTGG
AAGACTCATG TGCAGTTCGG AGGCGTCGAT CTTGAGGCGC CCGGAAAGGC CAGGGCCGAC
GGCCTGCTGC CCGGCGTTTC GGGCCTGCAG ATTGGTGTCG TCACCAGCAA CGAAGACCCG
GATGGCGAGC ATCGGGTGCG CGTCAAACTG CCGCTCCTCG GGCTGGCCAG CGACGGTCTG
TGGGCTCGGG TGGCCAGCCT CGATGCCGGC GACGACCGAG GCTTCTTCTT CCGCCCCGAA
ATTGGCGACG AGGTGACGGT CGGTTTTCTG GCCGACGATC CGCGCCACCC AGTCATCCTC
GGCATGCTGC ACAGCAGTGC CAAGCCGGCG CCGCTCGAAG GCAGCGACGA CAACCACGAA
AAGATGCTGA AGACCCGTTC CGGTATGACC GTGCATTTTG ACGACGACAA GATCGTCATG
ACCTTGGCCA CGCCGGCCGG GAATTCGATT GTGCTCAGCG AGGACGAAAA GTCGCTGACG
CTGGCCGACC AGAACGGCAA CAAGATGGTC ATGGACAGCG ACGGCATCCA TTTCGAGAGC
GCCAAGGCGG TCGAAATGAA GGCGGGCACG GAAACCAAGA TGGAAGCGAC GGCCAGCTTC
GAAATCAAGG CTGGCAGCGA ATTGAAGCTT GAGGGCAGCG CCAGCGCCGA ACTCAAGGGC
GGCGGCATGG CCAAGTTGTC CGGCGCCATG GTTCAGATCA ACTAG
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| Protein sequence | MPETRALPIA AEHREFTVKA GGQAVPREHQ LLSVSVTVAA NRIASARLVY VDGAASTGQF
PLSDGDLFTP GQSIEILAGA GRDSTSVFIG TVVRQGARVR EAAASQLVVD CRHAAMKLAV
TERSTDHFDK TDSDIIEAVL GAAGVGTDVE ATTLQHKQVL QYQSTDWDFI LARARANGQL
VWCEGDKVVL RKPALTGATV CTLQYGATLL EFEGEIDARL QHGEYKGTSW DAASQEAVEV
QAAMPSFTPP GNLSSDDLAG VADQAFDVRH PGLPEAETQA WVDGIALYRR VDQVSGRGKC
EGIATVKPGV VVELAGLGRR FNGKVLVTGV RHEFSLVQGW KTHVQFGGVD LEAPGKARAD
GLLPGVSGLQ IGVVTSNEDP DGEHRVRVKL PLLGLASDGL WARVASLDAG DDRGFFFRPE
IGDEVTVGFL ADDPRHPVIL GMLHSSAKPA PLEGSDDNHE KMLKTRSGMT VHFDDDKIVM
TLATPAGNSI VLSEDEKSLT LADQNGNKMV MDSDGIHFES AKAVEMKAGT ETKMEATASF
EIKAGSELKL EGSASAELKG GGMAKLSGAM VQIN
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