| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3576 |
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| Symbol | |
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| ID | 3567886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3829398 |
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| End bp | 3831233 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637682049 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_286775 |
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| Protein GI | 71909188 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGC TGCGCCGGCT GGGCGCCATA ATTGGTCAGT TCGATGCGCT GATCGCCGGC
GGGGCGTTGG CCTTGATGCT GCTGATCCCG CTGCTCGAAA TCGGGCTGCG GCCGCTGTTC
GGCCGGGGCA TCGAGAATGC GCCGGTACTG GTCCAGCATC TCGGGCTGGT GCTGGCCATG
TTTGGCGCGC TGGTCGCCGA GCGCGGCCAG CATCTGAGTT CGCTCGGCGC CGGTTTTGCC
GCCGCTGGCA ATCCGCTGGT TCGCGCCGCG GCCCAGAGCT TCGCCCGGGT CAGCGCCGCC
GTGCTGTGCG GCATGCTGAC CCAGACCAGC TGGACCTTCG TGGCCAGCGA GATGGATATG
CCACGCGACA TCGCCTACGG CATCGCCGGC TGGATGGTCG AGATTGCCAT GCCAATCGGC
TTTGCGGTGC TTGGTTTCAA GCTCGCCGGG CGGATTACGG ATAATCCAGC CGGTCGCGTT
GTTCTCGGCC TGCTGCTGCC GGTGGCAGGC TTCCTGTTTG CCGGCCATTT CGATGGCAGC
ACGCTGCCGT TCTGGCCTTT TGCCCTTTGG CTGATCGCCG TGCTGCTTTG CGGGGCGCCG
ATCTTCGCCG TACTTGGCGG GCTGGCGTTG GCCTTGTTCT GGAGCGAGGG CCAGCCGCTG
GCCTCGGTGC CGCTCAGCCA CTACCAGATC ACCGTCAATC CTTCGCTGCC GGCCTTGCCC
TTATTTACGC TGGCCGGCCT GCTCTTTGCC CGGACCGGGG CGGCGGCGCG GCTAGGGGCA
TTGTTCACCG CCCTGTTCGG CAACGGCGTC AGCGGAACTG CCATCGCGGC GGCCGTGCTC
TGTTCCTTCT TTACCGCTTT CACAGGCGGT AGTGGCGTCA CCATCCTGGC ACTCGGTGGT
CTGTTGCTGC CGTTGCTGAC CAAGGCCGGC TTTCCCGAAC AGCGCGGCAT CAGCCTGGTG
ACCAGCGCCA GTGCGCTGGG CGTTTTGCTG GCGCCGTCGG TGCCGCTGAT CATGTACGCC
ATCATCGCCC GCGTGCCGAT CAACACCATG TTTCTGGCCG GGGTGCTGCC GGCGGTGGTG
ATGGTTGGCT TTTTGCTGCT GCTTGGCGGC TATCTGCGCC GCGGCGCAAC GGCAGCGACC
GTCGCTGCCG AACCGCACAA TTTCAGCGCT GTTCGCCCGG CCCTGTGGGC GGCCAAGTGG
GAGCTGCTGG CACCCATGGT CGCCATCGGA TCGCTGGTCA GCGGTATCGC CACGCCGACC
GAAAGTGCCG CACTGACGGC CGCCTATGCC TTGCTGACCC AGGCGCTGGC CCACCGCGAA
CTGGACTGGT TGCACATCCG CCGAGCCCTG GCCGATTGCG CCGAAGTGAT CGGCGGCATC
ATGGTCATCC TCGGCATGGC GCTGGGCCTG ACCAACTACC TGGTCGATGC CGGCATTCCC
GATGCCGCCA TCGAATGGGT GCAGTCGGTG CTGCCCAACA GGTTCGCCTT CCTGATCGCC
CTCAACCTCT TCCTGCTGCT GGCCGGGGCG CTGATGGAAA TCTACGCTGC CATCGTCGTG
CTGGTGCCTT TACTGCTGCC GGTGGCGATC AGCTATGGCA TCGACCCGGT GCACTTCGGC
GTGATCTTCC TGGCCAATAT AGAGATGGGC TTCCTCTGCC CGCCGGCCGG GATGAACATC
TATTTCGCCT CGGCGATGTT TGGCAAGTCC ATTCGCTATG TAGCCGTCTC GGTGCTGCCG
GCCGTGCTGG CCATGCTGCT TGGCGCTTTG ACGATTTCGG CGCTGCCTTT CCTCGCCACC
TGGCTGCCTG GTCTGTTCAG CTTGCTGGCG ACTTAG
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| Protein sequence | MAALRRLGAI IGQFDALIAG GALALMLLIP LLEIGLRPLF GRGIENAPVL VQHLGLVLAM
FGALVAERGQ HLSSLGAGFA AAGNPLVRAA AQSFARVSAA VLCGMLTQTS WTFVASEMDM
PRDIAYGIAG WMVEIAMPIG FAVLGFKLAG RITDNPAGRV VLGLLLPVAG FLFAGHFDGS
TLPFWPFALW LIAVLLCGAP IFAVLGGLAL ALFWSEGQPL ASVPLSHYQI TVNPSLPALP
LFTLAGLLFA RTGAAARLGA LFTALFGNGV SGTAIAAAVL CSFFTAFTGG SGVTILALGG
LLLPLLTKAG FPEQRGISLV TSASALGVLL APSVPLIMYA IIARVPINTM FLAGVLPAVV
MVGFLLLLGG YLRRGATAAT VAAEPHNFSA VRPALWAAKW ELLAPMVAIG SLVSGIATPT
ESAALTAAYA LLTQALAHRE LDWLHIRRAL ADCAEVIGGI MVILGMALGL TNYLVDAGIP
DAAIEWVQSV LPNRFAFLIA LNLFLLLAGA LMEIYAAIVV LVPLLLPVAI SYGIDPVHFG
VIFLANIEMG FLCPPAGMNI YFASAMFGKS IRYVAVSVLP AVLAMLLGAL TISALPFLAT
WLPGLFSLLA T
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