Gene Daro_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3516 
Symbol 
ID3567381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3766558 
End bp3766827 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content55% 
IMG OID637681988 
Productperiplasmic nitrate reductase chaperone NapD 
Protein accessionYP_286715 
Protein GI71909128 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3062] Uncharacterized protein involved in formation of periplasmic nitrate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.107593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00119536 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCCGGA TGAACATATC CAGTGCCATT ATGTACATTG CGCCAGAGCG CCTCGAAGAG 
GCATGTGTGG CGTTGCTCCA GATGCCGGGA GTGGAAATTC ACGCCCGGAG CCCTGAGGGG
AAAGTCGTCG TTACTCTGGA GGATGACGAT ACAAATTCGG CTGCTGATAA GTACGTAGCC
TTGCATGGTG TTGCCGGCGT CGCATCGGTG GCCATGGTCT ATCAATACAG CGACGACGAA
TCAAAAGATA CCGAGGAGGT AGAGGCGTGA
 
Protein sequence
MGRMNISSAI MYIAPERLEE ACVALLQMPG VEIHARSPEG KVVVTLEDDD TNSAADKYVA 
LHGVAGVASV AMVYQYSDDE SKDTEEVEA