Gene Daro_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3404 
Symbol 
ID3568666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3653738 
End bp3655117 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content61% 
IMG OID637681876 
ProductATPas 
Protein accessionYP_286603 
Protein GI71909016 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT ATCTTGAACA CTTCGGGCTG CGTGAGCCCC CCTTCCGCAT CACGCCCCAC 
ACCGACTTCT TCTTCACCGG CGCCAACCGC GGGCCAACGC TCGACGCCCT GATCTATGCC
ATCACCCAGG ACGAAGGCAT CGTCAAGGTG ACCGGAGAAG TCGGCAGCGG CAAGACCATG
CTCTGCCGGA TGCTGCTTGA ACGCCTGCCG AAGAACGTCG AAACCCTCTA CCTGGCAAAC
CCTTCGCTCT CCCGACAGGA AATCCTTGGC GCCATCGCCG ATGAACTGGG CATACCGACC
GATGGCAAGG CAACGCATTC ACTGACCCGC GCCCTGCAGG ATGCACTGAT CGAGCGCTAC
GCCGAAGGCA AGCGCGTGGT GCTGCTGATC GACGAAGCGC ATGCCATGCC TGCCGAATCA
CTGGAGGAAA TCCGACTTCT GTCGAACCTC GAGTCGAAGG CCACCAAACT GCTGCAAATT
GCCCTGTTCG CCCAGCCGGA ACTCGATGAA CGCCTGGCCG CCACCGACAT GCGCCAGCTG
CGCGAGCGGA TCACCCAGCA CTTCAACCTG ACGCCCCTCA AGCAGGACGA CGTTGCCGCC
TACATTGAAT TTCGCCTGCG TGCAGCCGGC TACCATGGCC CCACCCCGTT CTCGGGCGAA
GCCATCCAGA TGATTGCCCG GATTTCAGAG GGGCTTTCCC GGCGCATCAA CATCCTCGCC
GACAAGGCGC TACTCGCTGC CTACTCCAGC GGCAGCCACA AAGTAGACAG CACTGAAATC
CGGATCGCTG AACAGGATGC CCGTTTTTCG CCATTGCAAC CGAAAGCACC CTTCAACCCC
AAGCCGCTGC TCTGGGGAAT CGCCGGCGCC GGCATTGGCG CCCTGCTCAT CGCCATGACC
ATTGGCGTGG GCTCTCCCCA CTCAGTGCCG GCAGGCGACA ACGAGAGCGC ACCATCGGCC
CCGCCAAAGC CACAAGCACC ACAGAGCGGA AAACGCCTGC AAGCGATACA GCCCCGCGGT
GAAGCACAGG ACCTAACCGC AACACCAGAC AAGATCCGCT TCGGCGCCCT GACCCGCCAG
CACTTCGCCC AATACGAAGA GTGGATCAAG GACGCCCCGC GCAACCACTA TTTCATCCAG
CTACTGGCGA CCGATGCCAG CCACACGGGC GAAGTCGAGG GTTTTCTTGC CCGGGCAATC
AACGTGCTCG AACCCGCACA CATTCGCGCC TATCGTTCCA GCCTCTCCGG TCGCGACAGG
GTAGGCATCA TCTTTGGCGA TTTCGAGAGC CGGGAAGAAG CAATTTTGGC CATGCAAACC
CTGCCGGAAT CGATCAAGGC AGTTCAGCCT TTCCCCAGAC AAGTCAGCAA GTTGCGCTAA
 
Protein sequence
MSLYLEHFGL REPPFRITPH TDFFFTGANR GPTLDALIYA ITQDEGIVKV TGEVGSGKTM 
LCRMLLERLP KNVETLYLAN PSLSRQEILG AIADELGIPT DGKATHSLTR ALQDALIERY
AEGKRVVLLI DEAHAMPAES LEEIRLLSNL ESKATKLLQI ALFAQPELDE RLAATDMRQL
RERITQHFNL TPLKQDDVAA YIEFRLRAAG YHGPTPFSGE AIQMIARISE GLSRRINILA
DKALLAAYSS GSHKVDSTEI RIAEQDARFS PLQPKAPFNP KPLLWGIAGA GIGALLIAMT
IGVGSPHSVP AGDNESAPSA PPKPQAPQSG KRLQAIQPRG EAQDLTATPD KIRFGALTRQ
HFAQYEEWIK DAPRNHYFIQ LLATDASHTG EVEGFLARAI NVLEPAHIRA YRSSLSGRDR
VGIIFGDFES REEAILAMQT LPESIKAVQP FPRQVSKLR