Gene Daro_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3400 
Symbol 
ID3568662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3650152 
End bp3650622 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content53% 
IMG OID637681872 
Producthypothetical protein 
Protein accessionYP_286599 
Protein GI71909012 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA CCGTACTCGA CCTGTGGGTC GGATTTTTCG TGGCACTTGG CCTTGCTGCC 
TTGCTTTTTT TGTCGCTCAA AGTTGGCAAC CTGTCGTCGT CTCACTTGTC TGAGACCTAC
GAGCTGCAAG CCAAGTTTGA TAACATCGGT GGTCTGAAGG TGCGTGGCCC GGTCAAGAGT
GCAGGTGTCG TGGTCGGGCG GATCATTGAT ATCCGATTTG ATGCGGCGAC CTATGAGGCA
GTGGTCAGCA TGACCATTGA TGGGCGTTAC CACTTTCCGA AGGATACGTT CGCGTCGATT
AATACGGCCG GTCTGCTCGG CGAGCAGTAT GTCGGACTGG ATGCTGGTGG CGACGAAAAG
ATGTTGCAGG CGGGTGAGAC GATAGCCAAG ACCCAATCGG CAATCGTGCT TGAGAAATTG
ATCAGTCAGT TTTTATTCAG CAAGGCAGCG GACGGACAGG ACAAGAAATG A
 
Protein sequence
MNRTVLDLWV GFFVALGLAA LLFLSLKVGN LSSSHLSETY ELQAKFDNIG GLKVRGPVKS 
AGVVVGRIID IRFDAATYEA VVSMTIDGRY HFPKDTFASI NTAGLLGEQY VGLDAGGDEK
MLQAGETIAK TQSAIVLEKL ISQFLFSKAA DGQDKK