Gene Daro_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3277 
SymbolqueA 
ID3566104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3528074 
End bp3529132 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID637681750 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_286477 
Protein GI71908890 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.977993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGA CCGTCGACGA CTTCGACTTC CCCCTCCCCC CCGAACTCAT TGCCCAACAC 
CCAGCCGCCG AACGGCGTGG GAGCCGCCTG CTGCACGTCT GCGGCGAGCA ACTTGTTGAC
CGCCGATTTG CTGACTTGCC AACGCTGCTG AAAGCCGGCG ACCTGCTGGT CTTCAACGAT
ACCCGGGTGA TCAAGGCGCG CTTCTTTGGC CAGAAGGATA CCGGCGGCCA AGTCGAAATC
ATGCTCGAAC GCATTGTCGA TGCGACGCAT GCAATCTGCC AGGTGCGCGC CAGCAAGGCG
CCGAAAGCGG GTAGCACGAT GCGGCTGGCC GATGCCTTCA CGGTCAAAAT GACTGGCCGG
GCCGGCGCCG ACGGAGATTT TTTTGCGCTG GAACTGGCTG AGCCTGGCGA TTTCTGGGAA
CTGTCGGAGC GTTACGGCAA GCTGCCGCTG CCGCCCTACA TCGAGCACCC GGCCGAAGGT
ACCGATGAAA CACGCTACCA GACGGTCTAT GCCCGCGAAC CGGGCGCTGT GGCTGCGCCA
ACGGCCGGAC TGCATTTCGA CGAAGACATG CTGGCTACGC TGCAGGCACA AGGCATCAAT
ACCGCCTTCC TGACCCTGCA TGTTGGTGCC GGCACCTACC GTCCGATGCG TGTCGAAAAA
ATCGCCGACC ACCGGATGCA CAGTGAACGC TTCGAGATTC CGCCAGCGAC CGCCGATGCG
ATCACCACCA CCCGCGCCGC CGGCGGCCAG GTCATTGCCG TCGGCACGAC CAGCCTGCGC
GCCCTGGAAT CGGCCGGCAA TGAGGATGGC ACAGTACAGG TCGGCGGCGC CGAAACCAGT
ATTTTCATCA CCCCCGGCTA TCGCTTCCAG GTCGTCGACC GGCTGATCAC CAATTTTCAC
CTGCCGAAGT CGACCCTGCT CATGCTGGTG TCTGCCTTTG CCGGCTACGA CCACATCCGA
GCCGCCTACG CCCACGCCGT CGCCGAGCGC TACCGCTTTT TCAGCTATGG CGACGCCATG
CTTCTGGAAC GAACAGGACA ACCCTCCGAT GCAATTTGA
 
Protein sequence
MSLTVDDFDF PLPPELIAQH PAAERRGSRL LHVCGEQLVD RRFADLPTLL KAGDLLVFND 
TRVIKARFFG QKDTGGQVEI MLERIVDATH AICQVRASKA PKAGSTMRLA DAFTVKMTGR
AGADGDFFAL ELAEPGDFWE LSERYGKLPL PPYIEHPAEG TDETRYQTVY AREPGAVAAP
TAGLHFDEDM LATLQAQGIN TAFLTLHVGA GTYRPMRVEK IADHRMHSER FEIPPATADA
ITTTRAAGGQ VIAVGTTSLR ALESAGNEDG TVQVGGAETS IFITPGYRFQ VVDRLITNFH
LPKSTLLMLV SAFAGYDHIR AAYAHAVAER YRFFSYGDAM LLERTGQPSD AI