| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3254 |
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| Symbol | |
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| ID | 3566392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3502263 |
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| End bp | 3502838 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681725 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_286454 |
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| Protein GI | 71908867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 0.712431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTCTC TTGTTTTTTT CAACAAGCCT TACGGTGTTC TCAGCCAGTT TACGCCGGAG
GGCAAGTGGC GGGCGCTGAA CGAGTTCATC ACGGTCAAGG ATGTTTACGT GGCCGGCCGG
CTTGATGCCG ACAGCGAAGG CCTGCTGATT CTGACTGATG ACGGCAAGTT GCAGGCGAAG
ATTGCCGACC CCAGGCACAA GCTGGAAAAG ACCTACTGGG CGCAGGTTGA GGGTGTACCG
GATGAGGCGG CCCTGGACAG GCTGCGTGCC GGCATCGAGC TGTCCGATTT CACCGCCAAG
CCTGCCAAGG TGCGGCTAAT TGATGAACCG GCCGGCTTGT GGCAGCGTGA TCCGCCGATC
CGCTTCCGTG CGGCAATTCC GACTTCGTGG CTGGAAATCC GTATCAGCGA AGGCAAGAAC
CGCCAGGTGC GGCGGATGAC GGCGGCCATC GGTTATCCTA CGCTACGTTT GATACGGGCG
GCCATCGGGG CGGCGACGCT GGATGGTCTG GCGTTGGGGC AATGGCGAAA AATCGATGGC
AGTTACCAGG ATTTGCAAGG AAGATTCAAT GAATAA
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| Protein sequence | MSSLVFFNKP YGVLSQFTPE GKWRALNEFI TVKDVYVAGR LDADSEGLLI LTDDGKLQAK
IADPRHKLEK TYWAQVEGVP DEAALDRLRA GIELSDFTAK PAKVRLIDEP AGLWQRDPPI
RFRAAIPTSW LEIRISEGKN RQVRRMTAAI GYPTLRLIRA AIGAATLDGL ALGQWRKIDG
SYQDLQGRFN E
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