| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3222 |
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| Symbol | |
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| ID | 3566607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3473088 |
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| End bp | 3474272 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637681693 |
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| Product | type II secretion system protein |
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| Protein accession | YP_286422 |
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| Protein GI | 71908835 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.333811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCG ACGTCGTCGC GGTGTTTCCC GGACAAGGCG TATCGCGCCT GCGCGTCGCC
GCCGATAGCG CGAGCGACCT GCCGCAGGCG ACCTCACTGC TTGGCGCCGT CATCGTCTCG
GCCGATCCGG TCGGGCAAAA ACGTGGCAAG AGTCGCAGCG GCAAGTTCCA GCTCCCCCTG
TTTACCCGCC AGTTGCTGTC GCTGCTCGAA GCCGGCCTCA ATGTCGTCGA GGGGCTGGAA
ACACTGGCCG AGCAGGATCA GGGCTCAGGC TCGAGCGAAG TCCTGAACGG CCTGCTCACC
GCGTTGCGCC AGGGCCAATC GCTGTCGACC GCGCTGCAGC GCTTCCCGGA GGTTTTCCCG
GAACTTTATG TCGCCACGGT CAAGGCCAGC GAACGGACCG GCGACATGCC GGAATCCCTG
CGCCGCTACC TGACTTTCGA CGAAAAGCTG CGCGAACTGA AGAAAAAGCT GGTCAGCGCC
GCCATCTATC CGCTCCTGCT GCTTGCGGTC GGCCTGCTCG TCACCTTCTT CCTGCTTGGC
TTCGTCGTGC CGCGCTTTGC GCTGGTCTTT GCCGACAGCG GCCGGCAGCC GGAAGGCCTT
TCCTCGCTGC TGTTCATCTG GGGCGATTTC GTCAACCAGC ATGCGGCGGG CCTGGCCATT
GGCAGCCTGC TCGGTGCTGT CGGTATCGCT GCCCTGCTCT CGCTGCCCCC CGTCCGCGCC
ATGCTGGCCA GGTTGCTCTG GCGCCTGCCG GCGATTGGCG AACGCCTGCG CATCGTCTAT
CTTGCCCGTT TCTACCGCAC GGTCGGCATG CTGCTGCGCG CCGGCATTCC GCTGCGCAGC
ACGCTGCTCA TGGTTGCCGA CATCCTGCCG GTTGCCTTGC GCGAGGGCCT GCAGCGGGCG
ATCAGCGATA TCGAGCACGG GCAGGCCTTC TCCGATGCCG CCCTGCACGG CGGCCTGAGT
ACACCGATCG CCCGGCGCAT GATCGCTGTT GGCGAGAAAA GCGGCCAGCT CGGCCACATG
CTGGAGTCGG TGGCCAGCTT CTACGACGAG GAAATCAACC GTCTGGTCGA TACCTTCAGC
CGCCTCTTCG AGCCGCTGCT GATGACCGTT ATTGGCGGCG TGATTGGCGG CATCGTCCTT
CTTCTGTACA TGCCGATATT CGAATTGGCC GGCAATTTCC AGTAG
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| Protein sequence | MEFDVVAVFP GQGVSRLRVA ADSASDLPQA TSLLGAVIVS ADPVGQKRGK SRSGKFQLPL
FTRQLLSLLE AGLNVVEGLE TLAEQDQGSG SSEVLNGLLT ALRQGQSLST ALQRFPEVFP
ELYVATVKAS ERTGDMPESL RRYLTFDEKL RELKKKLVSA AIYPLLLLAV GLLVTFFLLG
FVVPRFALVF ADSGRQPEGL SSLLFIWGDF VNQHAAGLAI GSLLGAVGIA ALLSLPPVRA
MLARLLWRLP AIGERLRIVY LARFYRTVGM LLRAGIPLRS TLLMVADILP VALREGLQRA
ISDIEHGQAF SDAALHGGLS TPIARRMIAV GEKSGQLGHM LESVASFYDE EINRLVDTFS
RLFEPLLMTV IGGVIGGIVL LLYMPIFELA GNFQ
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