Gene Daro_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3070 
Symbol 
ID3566245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3311457 
End bp3311825 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content58% 
IMG OID637681541 
Producttransmembrane protein 
Protein accessionYP_286270 
Protein GI71908683 
COG category[S] Function unknown 
COG ID[COG3308] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value0.753585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000683085 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACACCTA CCCGTTACCA GATCACCGCC AGCGCCAGCC TCATCGCGCT GATTTTCCTT 
TGCCTGGCCT GGGAGGGCTG GCTGGCGCCA CTCAAGCCTG GTGGCTCGTG GATGACGCTG
AAGGCGGCAT TCCTGCTCTT CCCGCTGTTC GGCATCCTGC GTGGCAAGCG TTACACCTAC
AAATGGCTGT CACTGTTCAT TCAGTTCTAT CTGATGGAAG GCCTCCTGCG TGCCACCAGC
GACAGCGGGC TTTCCCAGAA GCTGGCGACC GGTGAAACAC TGCTGGCTGC CATCCTGTTT
ATCTCAACCA TTCTTTACGT CAGGGCAACA CGCGCCCCCA AAGAAGAAAA AGCTGCCCAG
TCAAACTGA
 
Protein sequence
MTPTRYQITA SASLIALIFL CLAWEGWLAP LKPGGSWMTL KAAFLLFPLF GILRGKRYTY 
KWLSLFIQFY LMEGLLRATS DSGLSQKLAT GETLLAAILF ISTILYVRAT RAPKEEKAAQ
SN