Gene Daro_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3020 
Symbol 
ID3568688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3265449 
End bp3266396 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content57% 
IMG OID637681491 
Producthypothetical protein 
Protein accessionYP_286220 
Protein GI71908633 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.00142607 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.658817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGTC GTACTGCCGA TCACCTGTTC TGGATGTCCC GCTATATCGA GCGGGCCGAA 
AACCTGGCCC GTCTGCTCGA CGTGACGTGG CAAATGTCGA TGGTTCCGCA ATCCGAGGAA
GCGGCCAACC AGAACTGGAA CGCGATCATC GTCCTGAATA GCCTGGAAGA GGCTTTTGCC
GCCAAATATT CAGTGGTTAA TGGTGAAAAT GTCCTGAAAT TCATGGTCAG CGACCCGGAT
AATTATTCGT CCATTCATAG TTGCCTGCGG CTGGCTCGCG AGAACGCCCA TGCCGTGCGC
GGCACGCTGA CCACCGAAAT GTGGGAAACC TTGAACTACA CGTGGCTGGA AGCCCGTGAT
CGCAGTTTTG AGCAACTACT CAGTGCGGGG ATCAGCGATT ATTTCGAGTG GGTCAAAGTG
CGTTCATCGC TGTCGCGGGG TACCACCCTG GGAACGCTGT TGCAGGACGA AGCCTACAAT
TTTATCCGTA TCGGGACGCT GCTCGAACGG GCTGACAACA CGGCCCGCAT CCTTGACTTC
AAATACCACG TCCTGCGTCC ATTGGGCGAC GAAGGGGCCA CCGATTTCTA CGAGTGGGGC
GCCTTGCTAC GCTCGGTCTC GGCCTTCGAG GTTTATCGCA AGGTGTATCG GGACGCGATT
ACCCCAGATC GGGTCGCCGA ACTGCTGATT CTCAACAAGG ACATGCCGCG CTCGCTCCAC
TTCTGCATGA ACAGCGTGAT CAAGAATCTC GATCTGATTG CCAATCGTCA GTCCGGAGAA
ACTGCGCGCC AGGCCGGCTT GCTGCATGCC CAGCTGCACT ATGGTCGGAT CGAGGATATC
CTGGCGCAAG GGCTGCACGA GTGGCTGACC GATTTCATGG ATCGAATCTA TTTGCTCGGC
GACGGTATCA GCAAGGACTT TCTGGTCCCG ATGGCCGAGG TGGCCTAG
 
Protein sequence
MLSRTADHLF WMSRYIERAE NLARLLDVTW QMSMVPQSEE AANQNWNAII VLNSLEEAFA 
AKYSVVNGEN VLKFMVSDPD NYSSIHSCLR LARENAHAVR GTLTTEMWET LNYTWLEARD
RSFEQLLSAG ISDYFEWVKV RSSLSRGTTL GTLLQDEAYN FIRIGTLLER ADNTARILDF
KYHVLRPLGD EGATDFYEWG ALLRSVSAFE VYRKVYRDAI TPDRVAELLI LNKDMPRSLH
FCMNSVIKNL DLIANRQSGE TARQAGLLHA QLHYGRIEDI LAQGLHEWLT DFMDRIYLLG
DGISKDFLVP MAEVA