Gene Daro_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2996 
Symbol 
ID3567309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3235243 
End bp3235839 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content57% 
IMG OID637681467 
ProductLuxR response regulator receiver 
Protein accessionYP_286196 
Protein GI71908609 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.437807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC CGCAAGTCTA TCTGGTCGAC GATGACGAGG CGATCCGTGA CGCCCTCGCC 
TGGCTGCTCA AGTCGCGCGG ACTGCCCAGT ACCGCGTTCG ACTCGGCGGA AACATTCCTC
GCCGCGTGGA ACAAGGAAAT GAGCGGTTGC GTCGTCCTCG ACATGCGGAT GTCAGGCATG
AGCGGGCTGG ATTGCTTCGA TCGGCTGCAC GAACTCAAAT CAAGCCTGCC AGTCATTTTC
CTGACCGGAC ACGGCGACGT TCCACTGGCT GTTGCCACGC TGAAAAAAGG GGCCTTTGAT
TTTTTCGAGA AACCCCTCAA CGACAACGCC TTGGTCACCC GTATCGAGGA AGCCATGGCG
CTTGATGCCG AGCAACGGGC AGCAAACGCT ACGGTCGACT CGGTCAAGGC CCGCCTTTCC
TGCCTGACCA CTCGTGAACG CCAGATCATG GAACTGGTAC TGGCGGGAAA ATTCAACAAG
GTCATCGCCG ACGAACTGAA CATCAGCATG CGCACCGTCG AGGTGCACAG AGCGAACCTT
TTTGACAAGA TGCAGGTCAA AACCGCCGTT GAGCTGGCCA ATCTACTCAA ACCCTGA
 
Protein sequence
MSTPQVYLVD DDEAIRDALA WLLKSRGLPS TAFDSAETFL AAWNKEMSGC VVLDMRMSGM 
SGLDCFDRLH ELKSSLPVIF LTGHGDVPLA VATLKKGAFD FFEKPLNDNA LVTRIEEAMA
LDAEQRAANA TVDSVKARLS CLTTRERQIM ELVLAGKFNK VIADELNISM RTVEVHRANL
FDKMQVKTAV ELANLLKP