| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2966 |
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| Symbol | |
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| ID | 3566023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3203516 |
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| End bp | 3204652 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637681435 |
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| Product | GGDEF |
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| Protein accession | YP_286166 |
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| Protein GI | 71908579 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 0.682773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.664944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAG TGCATCCGCT GACGCTCAGC TTTCGTGACT CCGCGACGGA GCGAGCCTTT
GCCCGGCATC TGATGCCACG CCTGCGTCTG CAGGGCCGGG CGGCGATCGT GGTAGGCATC
GTTGTCTATT TTTCCTATGG AGCGCTGGAG CATCTGTTCG TGCCGCCCGA GCAGCTTGGA
CAGGTCTGGC TGATCCGTCT GGCGACCTTG CTGGTGCCGG TGTCCGTTCT GGCGCTGACT
TTCTCTCCAT GGTTCGAAAA AGCCAACCAG CTACCACTTG CCCTGGTCGG ATTTACGGCC
GCGCTTGGCT TGATTGCCAT GCTCTGGCAT CTGCCGTCAG GAAGCAGTAC CTACTACTAC
CCTGGCTTGA TGCTCGCCAC CTTCTATACC TACAACCTGA TCGGGGCTCG CTTCATTCAG
GCGTTGGTCG TCAATCTCGT GGTGCTGGTT CTCTACAACA TTCTGTTCGG TTTTGTGCGG
CAGTATCCGG AGGGAATGCT GCTTAGCCAG AATTTTTTCA TCATTTCGGC CAACCTGATC
GGTGGTGCTG CCGGCTATCT GGCCGAGTAT CAGCGACGCC AGCTTTTCCT TCGTGAATTG
CAACTCGATA ACGAGCGGCT GCTTCACCTT GAACGTTCAC TGCATGACCG GCTGACCGGC
TTGCCCAACC GTGAGCTGCT CGATGACCGG ATCAATCAGG CATTGGCTCT GGCTCGCCGT
GACCTGGCCC GCCATGCCGG GTTTTTTATC GATCTGGACG GGTTCAAGGA TGTCAATGAC
CAGCTTGGTC ATGATCGTGG CGACATTGCA CTGCGCGAAG TGGCGAGGCG ATTGGCCTCG
TCAATGCGTG AGACCGATAC CGTGTCACGG CTGGGGGGCG ATGAGTTTTT TCTCCTCATT
CAGGACATCG GTTCATGTGA TAGCGCCGCC CATCTGGCCG ACAAGTTGAT CTCATTGGTC
GAGCGGCCGA TTCCCGGTTT GCCCAAGACC CAGACGCTCA GCGCGAGTAT CGGCATCTGC
CTGTTTCCCC GAGCCGGGGG CGCAAACACC CCGGAAGGGA TCATTCGCTG CGCCGACCTC
GCCATGTATC AAGCCAAGTC GGAAGGCAAG CGACGCTTCT GCTTCGCCGA AGAGTGA
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| Protein sequence | MNRVHPLTLS FRDSATERAF ARHLMPRLRL QGRAAIVVGI VVYFSYGALE HLFVPPEQLG
QVWLIRLATL LVPVSVLALT FSPWFEKANQ LPLALVGFTA ALGLIAMLWH LPSGSSTYYY
PGLMLATFYT YNLIGARFIQ ALVVNLVVLV LYNILFGFVR QYPEGMLLSQ NFFIISANLI
GGAAGYLAEY QRRQLFLREL QLDNERLLHL ERSLHDRLTG LPNRELLDDR INQALALARR
DLARHAGFFI DLDGFKDVND QLGHDRGDIA LREVARRLAS SMRETDTVSR LGGDEFFLLI
QDIGSCDSAA HLADKLISLV ERPIPGLPKT QTLSASIGIC LFPRAGGANT PEGIIRCADL
AMYQAKSEGK RRFCFAEE
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