Gene Daro_2868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2868 
Symbol 
ID3566332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3087847 
End bp3088830 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content58% 
IMG OID637681337 
Productmalyl-CoA lyase or citrate lyase, beta subunit 
Protein accessionYP_286068 
Protein GI71908481 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCATC CGAAAGCAGT TCTTTTTGCC GGCGAAAAGC CCTTCCCCAT CCTTCCGGCG 
GTCGACCATT ACGCCGGCTC GGAAAAACTG ATGCGCAAGG CACTCCAGTT GCAAAAGGAG
CTAGGCCCGA TCTTCGACAT CACCTGTGAC TGCGAAGATG GCGCCCACGC AGGGGCCGAA
CGAGAGCATG CAGAAATGGC TGCCAGCGTA ATCATGAGTG AGGACAATCT GTTCAATCGC
GTTGGCGCTC GTGTTCATGA CGTCACCCAT CCCCACTGGC AACAGGATAT GGAAATCCTG
GTCAGCCAAG CTGGCAAACG ACTCCCTTTC ATCACGCTCC CCAAACCCTG CAGCGCCGGT
GATGTTCAGG TACAGATCGA AGCGCTGCGC GAGATAGAGC AAAAATTTGG CATCGACCAT
CGGATTCCCG TCCACGTGCT GATCGAAACC CATGGCGCAC TGCGCGAAGT TTGGGAAATC
GCGGCCTTGC TCGGAGTCGA AAGCCTGGAT TTTGGCCTGA TGGACTTTGT CTCAGGGCAT
CACGGCGCCA TCCCCGGCAG CGCGATGAAA AGCCCGGGTC AGTTCGATCA CCCGCTGGTC
GCGCGCGCCA AGTGTGAAAT CAGCGCTGCC GCTTTGGCCA ACGGCATTGT TCCGTCACAC
AACGTGACGA CCGAACTGAA AGACATCGCG TACATCCGCA ATGATGCGCT ACGGGCCCGA
AGCGAATTCG GCTTCCTGCG CATGTGGAGC ATCCACCCGA ACCAGATCCT GCCCATCGTC
GAAGCGATGC GCCCGGATTT TTCGGAGGTT CAGGCAGCAG CCGAGATTCT GATCGCCGCC
CAGGATAAGG ACTGGAGCCC GATCCAGCAT GAAGGCAAAC TGCACGACCG CGCCTCCTAC
CGCTATTACT GGGAATTGCT CGACCGCGCC CACGTCACCG GCATGGACAT CCCGGCCATA
GCCAAGCAGC GTTTCTTTGC CTGA
 
Protein sequence
MRHPKAVLFA GEKPFPILPA VDHYAGSEKL MRKALQLQKE LGPIFDITCD CEDGAHAGAE 
REHAEMAASV IMSEDNLFNR VGARVHDVTH PHWQQDMEIL VSQAGKRLPF ITLPKPCSAG
DVQVQIEALR EIEQKFGIDH RIPVHVLIET HGALREVWEI AALLGVESLD FGLMDFVSGH
HGAIPGSAMK SPGQFDHPLV ARAKCEISAA ALANGIVPSH NVTTELKDIA YIRNDALRAR
SEFGFLRMWS IHPNQILPIV EAMRPDFSEV QAAAEILIAA QDKDWSPIQH EGKLHDRASY
RYYWELLDRA HVTGMDIPAI AKQRFFA