Gene Daro_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2645 
Symbol 
ID3567137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2841564 
End bp2842241 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content61% 
IMG OID637681109 
ProductOmpA/MotB 
Protein accessionYP_285845 
Protein GI71908258 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCA CCTTTTTGAA CTACCACAGG TTCGGCCTCA TTGGCTGCTG CGCTCTCCTC 
GCTACATCGT GCAGTCTGTT TCATAACGCG GCGCAGAAGG ATCACCCAAA GAACACGGGT
GACGCTGCTC CCGGGCAACT GGCTCAACTC GATTTCGGCC GCCAAGCAAC TTTCGGACAC
TGCGTACCGC CGGCCTGCCC AATCCGCACG CCCAAAACCC TCGCCTCGGA TTCCTCAGTC
CGGACAGTCG ACCGGGCAAC GTCATCCTCC CCGGCCCATC CCATCGCCTC TGAACCGACC
ACCCCTCTCC CAACACCAAA GACCGACACT TCACGGACGA TCACTATCCA GTTCGGCCTC
GGCAGCGCAA AGCTAAGCCC CGCTGCCCAT ACCAGCCTGA ATGAGGTAAT GACTGCCCTG
CTCTCGGCGC GCCAGATCAC GATCATCGGC CGTACGGACA ACACAGGGCC GTTGGCCTTC
AATGAATCAC TGGCCCTCGC TCGCGCTCTG GCGGTTCGCG ACCACCTTAT CAAAAAATAC
CCGAGGCTGA TGCCAACGCT GAGCGTCAAG GCGCGCGGTG CCTGCTGTTT CATTGCCGCG
AACGACACCC TGGCCGGCCG TACGCAAAAC CGGCGGGTCG AGTTGGTCTT TGATCTGCGC
GACAAGGTGC AGCCATGA
 
Protein sequence
MKATFLNYHR FGLIGCCALL ATSCSLFHNA AQKDHPKNTG DAAPGQLAQL DFGRQATFGH 
CVPPACPIRT PKTLASDSSV RTVDRATSSS PAHPIASEPT TPLPTPKTDT SRTITIQFGL
GSAKLSPAAH TSLNEVMTAL LSARQITIIG RTDNTGPLAF NESLALARAL AVRDHLIKKY
PRLMPTLSVK ARGACCFIAA NDTLAGRTQN RRVELVFDLR DKVQP