Gene Daro_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2456 
Symbol 
ID3568229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2657543 
End bp2658079 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content60% 
IMG OID637680924 
Productcondensin subunit ScpB 
Protein accessionYP_285661 
Protein GI71908074 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.0826453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACCGA GCCTGATCAA GAGAGTGCTT GAGGCGGCGC TGCTCGCCGC GCGTGAGCCG 
ATGACGCCCA GCGACATGAA AAAGATGTTC GACGAGGAAT TTTCGTCCGA AACCCTGCGC
AAGCTGCTCG ACCAGCTCCG CGAGGAGTGG GCCGAGCGGC CGGTCGAACT GATCCAGCTC
GCGTCCGGCT GGCGCTTCCG GACGCGGGCC GAATACCTGC CGTACATCGA GCGTTTGAAC
CCCGAGCGGC CGCCAAAATA TTCGCGCGCC GTCCTTGAAA CCTTGGCCAT CATCGCCTAT
CGTCAGCCGG TAACGCGGGG TGATATCGAA GAGATTCGTG GTGTCGCGGT CAATACCAAC
GTCGTCAAAA CCCTTGAAGA GCGCGGCTGG ATCGATGTTG TCGGCCATCG TGATACACCG
GGGCGGCCAG CGCTATTTGC CACGACCAAG CAATTTCTCG ATGATCTCGG TCTCAGAAGC
GTCAGCGAAC TGCCGCCGTT AGAACAAATC AGCCAGACAC TGGAGCTGGA ACAATGA
 
Protein sequence
MEPSLIKRVL EAALLAAREP MTPSDMKKMF DEEFSSETLR KLLDQLREEW AERPVELIQL 
ASGWRFRTRA EYLPYIERLN PERPPKYSRA VLETLAIIAY RQPVTRGDIE EIRGVAVNTN
VVKTLEERGW IDVVGHRDTP GRPALFATTK QFLDDLGLRS VSELPPLEQI SQTLELEQ