Gene Daro_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2394 
Symbol 
ID3567578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2580680 
End bp2581900 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content50% 
IMG OID637680861 
Producthypothetical protein 
Protein accessionYP_285600 
Protein GI71908013 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.48898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.587335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAA CGCTCTCACT AGCCTTTTTG AGCATTTTCA GGCAGTTTCG TCGCTCGACG 
ACAGCTGTAT TGGCAATCAC ATCCGGAATC GCAGCACTGC TCTTGGCCAG CGGCTTTATC
GAATGGAATC TGCGCTACGG TCGCGAATCA ACCATCCACT CCGAACTCGG TCATATTCGC
ATTTTCAAAC CGGGTTATTT GCAATCAGGT TTAGCTGATC CATTTGAGTT TCTGCTCGAT
GCGGATGCCA GTCGTGAAAA AGCAGTCCTA CAATTACCTC ATGTAGAGCT ACTGACCCCT
CGACTATCTT TCAATGGCTT GGCTAGCTAC GGAGAATCAA CAATCTCTTT CATCGGAGAA
GGCGTAGACC CCACTCTCGA GGAGCATTTG AGCAAATCCT TGACCATTGT CTCAGGCCGC
CCCCTGTCAC CTGAGCAGCA AAAAGGAATT ATCATTGGCC AAGGCTTGGC AAACAACTTA
GGGGTAAAGC CTGGCGATAC TCTAGTTCTG ATGGCAAATA GTGCGACAGG AGGGGTAAAC
GCAGCAGAGG TGACTGTACT TGGGCTTTTC GCGACCATCA CGAAAGCCTA CGACGATGCT
GCATTGCGAG TCCCAATCAC CCTCGCTCGC CAGTTGCTAC GCGTCAAGGG GGCTCACACC
TACGCGATCC TCCTGGACAA GACCGAAAAC ACATCAGAAA CCTTGAGCGA TCTAAAAAAG
CATTTTGCCG GGAAAAATCT TGAGTTCATA CCATGGTATG ACATGGCTGA TTTTTACAAC
AAGACGGCAG AACTATTCTC ACGCCAGGTA AGCATCGTTC GACTGATCAT TGCCGTCATC
ATCGTACTAA GCATATCGAA TACGCTAATG ATGAACGTTA TGGAGCGAAC GGGTGAGATA
GGGACGATTA TGGCCACTGG CGTCAAGCGC AAAGAAGTGC TTAGTCAGTT TTTAGCAGAA
GGAGTCATAC TGGGCCTTAT CGGAGGAGCG CTAGGGCTTG TACTTGCATA CGCTTTTGGT
GCACTGATCT CTGCCGTTGG CATACCCATG CCAGCCCCGC CAGGCATGTC CTTTGGCTAT
ACCGCGGAAA TTCTCATTAC TTGGCAGATG GCATTGGATG CATATTTGCT TGCCATCATT
ACAACGCTGC TGGCCAGCGT GATCCCTGCA GTTAAGGCAT CGCGCATGGA AATCGTCAAT
GCGTTACGTC ACAATCGCTA A
 
Protein sequence
MMTTLSLAFL SIFRQFRRST TAVLAITSGI AALLLASGFI EWNLRYGRES TIHSELGHIR 
IFKPGYLQSG LADPFEFLLD ADASREKAVL QLPHVELLTP RLSFNGLASY GESTISFIGE
GVDPTLEEHL SKSLTIVSGR PLSPEQQKGI IIGQGLANNL GVKPGDTLVL MANSATGGVN
AAEVTVLGLF ATITKAYDDA ALRVPITLAR QLLRVKGAHT YAILLDKTEN TSETLSDLKK
HFAGKNLEFI PWYDMADFYN KTAELFSRQV SIVRLIIAVI IVLSISNTLM MNVMERTGEI
GTIMATGVKR KEVLSQFLAE GVILGLIGGA LGLVLAYAFG ALISAVGIPM PAPPGMSFGY
TAEILITWQM ALDAYLLAII TTLLASVIPA VKASRMEIVN ALRHNR