Gene Daro_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2372 
Symbol 
ID3568586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2556265 
End bp2557497 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content64% 
IMG OID637680839 
Producthypothetical protein 
Protein accessionYP_285578 
Protein GI71907991 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.114721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.587335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCTC GCCTGCTCGC CCTCTGGCTC AAGGAATCGA TCGCCCTGCT GCGCGACCGG 
CACGGCCTGC TAGCGTTGTT CATCATGCCG ACCATTTTCA TCCTGGTCAT GACCATGGCG
CTACGCGACG CCTTTTCGCC GGGCGTCAGC ATCGACGCCG CCTATGTCGT GGTCGACCTC
GACCACAGCC AGCACTCAAA AGCACTGATC AAGCGGCTCG ACAAGAGTGT TTCCTTCAAG
CGCCTGCCAG CCGCCGACGA TGCCGAAAAC GCCCGCCAAG GCATCCTCAA TGGCCATCAC
GTGCTGGCCC TGGTCCTGCC CAAGGGATTT GGCGAGCGCC TGCTGGCACC GGCCGGCGCC
GATGGACAGC CGACAGAGGC CCTGCAATTG CTGCTCGACC CGGCCCTCAG CCCGGCCCTG
CAACTCGCTT TCCGCAATCA GGTCATGGCC GCGCTCGGCG CAGTGCGGGC CGATGAACTG
ACGCGCAGCG CCGGCAAGCT GTTCGGCCTG CCCATCGCTC CCGGTGCAGA TACCGAACGC
GAATGGCCGG ACGAAATCCA CAGCGTCGCC GTGCGCAACG ACCGCAGCGT TCGCCCGCCT
TCGTCGGTTC AGCAGAACGT ACCGGCCTGG CTGATCTTCG CGATGTTCTT CGTGGTCATT
CCGGTCTCGT CGATATTCAT CATCGAACGC CAGCAAGGCA CCCTACAGCG CCTGCGCGCC
ATGGGCCTTC CTTTCCACCT GATCCTGGCC GGCAAGCTGC TGCCCTTTTT CATCGTCAAT
CAACTGCAAG CCGTGCTGAT GGTGCTGGTC GGCATTTACC TCGTGCCGCT GTTCGGCAGC
GAAGCCCTGG AGCTGCCGGG CAGCCTGCCG CTGTTGCTGA ACCTGTGGGC CGTCGCTGCT
GCCGTCAGCC TGGCCGCCGT CTCGCTCGCG TTGCTCGTCG CCAGCCTGGC ACGGACCTCA
GAACAGGCGA CGGTCATCGG CGGCGTCGGC AATATCCTGA TGGGCGCCAT CGGCGGCATC
ATGGTGCCGA AATTCATCAT GCCGGCCGCC ATGCAAAAAC TCGCTACCCT GTCACCGATG
GCCTGGGGCC TCGAAGGCTT CCATATCGTG ATGCTGCGTC ACGGCAGTTT CGCCGACATC
CTGCCCTCCC TGGCCCAGTT GCTCGTCTTT GCTGGCGCTG CATTGGCCGC TGCCGTCTGG
CTCAACCACC GTTCTCTTGC CGCCCAATCA TGA
 
Protein sequence
MSPRLLALWL KESIALLRDR HGLLALFIMP TIFILVMTMA LRDAFSPGVS IDAAYVVVDL 
DHSQHSKALI KRLDKSVSFK RLPAADDAEN ARQGILNGHH VLALVLPKGF GERLLAPAGA
DGQPTEALQL LLDPALSPAL QLAFRNQVMA ALGAVRADEL TRSAGKLFGL PIAPGADTER
EWPDEIHSVA VRNDRSVRPP SSVQQNVPAW LIFAMFFVVI PVSSIFIIER QQGTLQRLRA
MGLPFHLILA GKLLPFFIVN QLQAVLMVLV GIYLVPLFGS EALELPGSLP LLLNLWAVAA
AVSLAAVSLA LLVASLARTS EQATVIGGVG NILMGAIGGI MVPKFIMPAA MQKLATLSPM
AWGLEGFHIV MLRHGSFADI LPSLAQLLVF AGAALAAAVW LNHRSLAAQS