Gene Daro_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2312 
Symbol 
ID3566225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2494291 
End bp2494968 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID637680778 
ProductOmpA/MotB 
Protein accessionYP_285518 
Protein GI71907931 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA CCCTTCTGAA CTACCGTAGT CTCGGCATCA TTGGCTGTTG CGCCGTTCTG 
GCCGCATCGT GCAGCCTGTT CCATAACGCG GCGCCACAGG ATCACCCAAA GAACTCGGTT
GACACTGCCC CCGTGCAACT GGCGCAACTC GATTTCGGCC GCCAAGCAAC TTTCGGACGC
TGCGTACCGC CAGCCTGCCC GACCCGGACC CCCAAAACCC TCGCAACGGA TTCCTCAGTT
CGGACGGTCG ACCGCGCCGC ACCATCCTTC CCGGCCCAGT CCATCCCCCC TGAACCTGCC
ACCCCGCCTT CAACACCAAA GATCGACACT TCACGGACGA TCATTGTCCA ATTCGGCCTC
GGCAGCGCAA TGCTAAGCCC AGCTGCCCGT TCCAGCCTGA ATGAGGTGAT GAGTGCCCTG
CTCTCGGCGC GCCAGATCAC GATCATCGGC CGCACCGACA ACACCGGGCC GCTGGCCTTC
AATGAATCAC TGGCCCTCGC CCGCGCTCTG GCAGTTCGCG ACCACCTGCT CAGCACCCAC
CCGATGCTCA CACCCACGCT GAGCGTCAAG GCTCGCGGCA CCTGCTGTTT CATCGCCGCG
AACGACACCC TGGCCGGCCG TACGCAGAAC CGGCGGGTCG AGTTGGTCTT TGATCTGAGT
GACAAGGCGC AGCCATGA
 
Protein sequence
MTATLLNYRS LGIIGCCAVL AASCSLFHNA APQDHPKNSV DTAPVQLAQL DFGRQATFGR 
CVPPACPTRT PKTLATDSSV RTVDRAAPSF PAQSIPPEPA TPPSTPKIDT SRTIIVQFGL
GSAMLSPAAR SSLNEVMSAL LSARQITIIG RTDNTGPLAF NESLALARAL AVRDHLLSTH
PMLTPTLSVK ARGTCCFIAA NDTLAGRTQN RRVELVFDLS DKAQP