| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2253 |
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| Symbol | |
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| ID | 3566440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2439146 |
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| End bp | 2440342 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637680720 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_285460 |
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| Protein GI | 71907873 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.706134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA TCCTCCCGAC AACCCTCTTG GCCCTCTCGC TGGTGCTGGT CGCCTGCGGT
CGTAACGCGC CTGAGAGCAG CACCGTGACG GAAAAGCCCG CCGCTGCCCC AGAAAAAACT
GCTACCGGCG AAAAAGCAGC ACCGACCGAA GCGCCGGAAG CCGGCCAGTT ACATCTGACG
GAGGCGGAAA TCAAGGCCGC CGGCATTCGC ACCGAAGACG CCACTGAAGC GGAGGTTCAC
GAGCGGATCG CCGTAACGGC AACCATCCAG GCCAATCAGG ATCGGCTGGC CCATGTTGCC
CCACGGGTGC CAGGCCGCAT CGTCAGCATT GCCGCCAAAT TGGGGGATCG GGTTAAGGCG
GGGCAGGCCC TGGCCAGCCT GGACAGCATC GAACTGGGTG AAGCCCACTC CACCTACCTC
CAGGCCGACA GCCAGTACCG ACTGGCCCAA GCCGATTTCG AGCGGGCCGA AAAGCTTTAC
GCCGACCAGA TCGTGCCGCA AAAGGACTAC CTGCGCAGCC GTGCAGAGCA CGAGAAAGCC
CGCGCCAACT TGCGGGCGTC AACCGACAAG CTGCGTCTGA TGGGCGTGAC GCCGGCCCGC
TCGGAAACCG CCATGTCGGT GTTCCCGGTC AATGCGCCAT TTGCCGGAAC AGTGATCGAA
AAGACAGCGG TGTTAGGCGA ACTCGCCCAG CCGGACAAGG CACTGTTCAC CGTGGCCGAC
CTATCCGTGG TCTGGATCGA GGCCAGCCTG TTCGAGAAAG ACCTCGGAAA GGTAAAAACC
GGTGCCACGG TTGGCGTGAC AGTCGCTGCT TATCCGGACG AAGTGTTCAA AGGGCGTCTG
ACCTACATCA GCAGCGTCAT GGACAAGGAA AGCCGCACGA TCAAGGCACG GGTGGAAGTC
GCTAATGCCG ACGGTCGCCT GAAGCCCGAC ATGTTCGCCA ACGCAGCCAT CGACACGACG
ACGGCGGGCA AGGCGCTGAC GGTGCCCTCG GGGGCCGTGC TTTTGCTGGA AGGCAAGAAA
GCGGTCTTTG TTCGCGAGAA GGAAGGCTTC GAGAAGCGAG AAGTCGAACT CGGGGACAAC
CTCGGTGGCC GTTTCGTGAT CAAGAGCGGC ATCGAAGCCG GCGAAGCCGT GGTGGTCGAC
GGTGCCTATG CGCTCAAGGC GCGGCTCCTG AAATCCAAAA TCGGCGATCA CGACTAA
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| Protein sequence | MTRILPTTLL ALSLVLVACG RNAPESSTVT EKPAAAPEKT ATGEKAAPTE APEAGQLHLT
EAEIKAAGIR TEDATEAEVH ERIAVTATIQ ANQDRLAHVA PRVPGRIVSI AAKLGDRVKA
GQALASLDSI ELGEAHSTYL QADSQYRLAQ ADFERAEKLY ADQIVPQKDY LRSRAEHEKA
RANLRASTDK LRLMGVTPAR SETAMSVFPV NAPFAGTVIE KTAVLGELAQ PDKALFTVAD
LSVVWIEASL FEKDLGKVKT GATVGVTVAA YPDEVFKGRL TYISSVMDKE SRTIKARVEV
ANADGRLKPD MFANAAIDTT TAGKALTVPS GAVLLLEGKK AVFVREKEGF EKREVELGDN
LGGRFVIKSG IEAGEAVVVD GAYALKARLL KSKIGDHD
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