Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2238 |
Symbol | |
ID | 3566425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2420489 |
End bp | 2421799 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637680707 |
Product | DNA repair exonuclease-like protein |
Protein accession | YP_285447 |
Protein GI | 71907860 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 0.74733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.111488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA TCGCGCATTT CTCCGATCTG CACTACGGTA CCAAGAAACT GGCGGAAGCC GACCGTTGCT TCGGCGCTGC CATCGACCGG GCCATCGCGT TGGGTGCGGA GGCGGCGGTT CTCTCGGGCG ATGCCACCGA CCATGGCCTG GACTTGCATG CACCGGCCGC CGAACGGCTT GTCGCGCAGG TGCGGCGACT GGCTGACCAC TGCCCGGTGT TGATGCTGCA AGGGACATTC TCGCATGAGC CACCGGGCAC CCTGGCGATC TTCCGGCTGC TGGGCGGACG GCATCCGGTG CATGTGGCCA GCAGTATCGC GCAGGTCGCG CTCACGGCCC AGGACGAATG GCTCGCTTCG ACCAGTTGGT GTTTCGATAG TTTGCCGGCC GGTGCTCGTG CCCTGATTAC CTGCATCCCC ACGGTGAACA AGGCGGTGGT GGCCGCAACA GTCGGTGCGG CGGAAGCCGC GCAAGCCGTG GGCGAGCACC TGGCCCTGCT GCTGCGCGGC TACGCGCCGA TCCACCGCGC GGCACGTCGG CAGGGCGTGC CGACCATCGG CGTGTCGCAC GGCACGGTGT TCGGCTGCGT GAGCGAGCAC GGCGTGCCGA TGGCCGGTTT CGATCACGAG TTCACGACCG GTGCCCTGTT CGGTGCCGAG GCCCAGGCCT TCATGCTCGG GCACATCCAC CGGCATCAGG CATGGGAGCA GGAAAGCATC GCAGGGCGGC AGTGTATCGC CTATCCCGGC TCGATCGGTC GCTTTCATTA CGGCGAGGAA GGGGGCAAGG GGTTTCTGTT CTGGGAAATC GACGCCGACC AGGCGCGCTT CACGCTGGAG CCCACGCCCG CGTGCCGAAC TGTCGATATC GTTTTCGAGG GCAAACCCGA CCTCGACGCC CTGCGCGCGG CTGTCACGCA GCAGGACATC GCTGGCGCGT TCGTGCGCGT GCGCTGGACC GTCGCCGAAG AAGACCGCCA CCAGGTCGAC CGCGCGGCGA TTGAGCGGCT GCTGGAGGGG GCGGCGGAAA CCAAGCTGGA AGGGCGCATC CTGCCCGTGG TGCGCACGCG GGCGGCAGGG ATCTCGCAAT TGGGGAATCT GGCGGACAAG GTTCGTGTCT GGGCGCAGGT GACCGAGGCG CGGGCGGAAC CCTTGCTCGC GTGCCTCCAG GCGCTGGCAA GCCAGGAACC GGAAGCCATC GCCGAACTTG TGCTGCTTGG GCTGGAAGTC CGCGATGGCG AGGGAGGCGT CGACACCGCT GTCTCCCGGT CGCCACCCAT GGCCGATCTT GAACCCACAC TGTCGTTTTG A
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Protein sequence | MIRIAHFSDL HYGTKKLAEA DRCFGAAIDR AIALGAEAAV LSGDATDHGL DLHAPAAERL VAQVRRLADH CPVLMLQGTF SHEPPGTLAI FRLLGGRHPV HVASSIAQVA LTAQDEWLAS TSWCFDSLPA GARALITCIP TVNKAVVAAT VGAAEAAQAV GEHLALLLRG YAPIHRAARR QGVPTIGVSH GTVFGCVSEH GVPMAGFDHE FTTGALFGAE AQAFMLGHIH RHQAWEQESI AGRQCIAYPG SIGRFHYGEE GGKGFLFWEI DADQARFTLE PTPACRTVDI VFEGKPDLDA LRAAVTQQDI AGAFVRVRWT VAEEDRHQVD RAAIERLLEG AAETKLEGRI LPVVRTRAAG ISQLGNLADK VRVWAQVTEA RAEPLLACLQ ALASQEPEAI AELVLLGLEV RDGEGGVDTA VSRSPPMADL EPTLSF
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