Gene Daro_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2195 
Symbol 
ID3566689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2371391 
End bp2371753 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content58% 
IMG OID637680664 
ProductType IV pilus assembly PilZ 
Protein accessionYP_285404 
Protein GI71907817 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3215] Tfp pilus assembly protein PilZ 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.609234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG CAAAACCCGC TCCCCAGCGC CCGAGCGTTC TCTCGCTGAA CATCAATTCA 
AAATCCGCGC TTTATGCTGC GTTTATGCCG CATTTGCGAG CTGGTGGTAT CTTTATTCCG
ACGACCAGAG GCTACAAGAT CGGCGACGAA GTGTTCATGC TTCTTTCGTT GATGGACGAC
CCGGCCAAGC TGCCAATCGC CGGCACTGTG GTCTGGATTA CTCCGGCGGG GGCCCAGAAT
GGTCGGGCGC AGGGTATCGG CGTGCATTTC AACAATGACG AAAGCGGTCA GGAAGCGCGG
CGCAAGATCG AAGGCCTGCT CGGCGGTGTC ATGCAATCTG CACGGCCGAC GCACACGCTC
TGA
 
Protein sequence
MSEAKPAPQR PSVLSLNINS KSALYAAFMP HLRAGGIFIP TTRGYKIGDE VFMLLSLMDD 
PAKLPIAGTV VWITPAGAQN GRAQGIGVHF NNDESGQEAR RKIEGLLGGV MQSARPTHTL