Gene Daro_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2113 
Symbol 
ID3567009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2282075 
End bp2283349 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content63% 
IMG OID637680586 
ProductSodium/hydrogen exchanger 
Protein accessionYP_285326 
Protein GI71907739 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.397274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.19888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA CGATCACTGC GCCATTGCGC ACCATTTGGG AAAGCCTGCT CGAACGCCTG 
TTTTTCCTGC CGCCCTTTCC CGAGACCATT GATTCGCTCG CCCTGTTCAG CCTGTTGCTG
GTCGTCGGTC TGCTTCTCGG CGAATGGCTG CACGCCCACG CCCGCTGGCC CAAGGTCACC
GGCTACGTGC TGGCCGGCAT CGTATTCGGT CCATCGGCAC TGGGCTGGAT CAGCATCGAG
GCCCTGGCTC AGGCGCGACC GATTGCCGAC GCAGCCCTAG GTTTGCTGAT GATGGAGGTC
GGGCGGCGTC TCGACCTGAG TTGGCTCCGG CGCAATCCGG AATTGGTGCG CAGCACACTG
GCTGACATCA CGCTGTCGTT TGCCCTGATC TTCATTTTCG CCCTCTGGCT GGTCGGTCTG
ACACCCGCCT GGGCCGCCGC CACGGCCGCC GTGACCATGG CCTCGGCCCC GGCCGTGGTC
CTGTTGACCA TTGAGGAAGC CAAGGCCCAG GGACAGGTCA CCGAACGCAT CATCCTGCAT
ACCGCTCTTG GCTCAGCCGC ATCCTTTGTT GCCTTCGCCG TCGTGCTCGG CATCGTTCAC
GCCGAACTGA GCGAAGACTG GCTCAATGCC CTTGTCCATC CGCTGTGGGT GGTCGTCGGC
GCGTTTCTGG TCGGCGGCAT CGGCACCTGG TTGGCGCTGC GCATTGCTAG AACCTTACCG
AAAGGCTCAC TGGCCCAGGT TTTTGTCCTG ATCGCCTGTG CCCTGCTGGC CGTCGGCATC
GCGCGCATGC TCGCCGTGCC GGTCTTTTTG ACCCTCTTTC TGATGGGCGT TCTGCTCGCT
TCGCGTGACC GGCAACAAAC CCTGCGTTAC ACCGCTTTGC CCGAAGGGCA CTGGCTACTC
GCCATCGTGC TTTTTGTCAT CGTCGGCGCC TCCTTGCCCT GGCAGGACTT CACTTGGCAG
GCCGGCCTGC AGGCACTCGG CCTGCTGCTG GTGCGCGCGG CAGCCAAAGC TGGGGCGATG
GCCTGGTCGG GCGGCAGCAT GCCCTTGCCC AAACGCCTGC TGGTTGGCAT GGGTATCCAG
CCACTGTCGG CCACGGCCGT ATTCATGGCC TATGAAATCG CCAGTTTGTA CCCGGAAGTC
GGGCGTTCGG CCCTAACCTT GCCCCTTTTC GCCGCCGCCA TGATGGAACT GGTCGGCCCT
GCCCTATGCC GACTGGCGCT GCATAGATCA GACGAATGCG AAAGCGGCGA GCGTGATCGA
GGAGGTATCG CATGA
 
Protein sequence
MIETITAPLR TIWESLLERL FFLPPFPETI DSLALFSLLL VVGLLLGEWL HAHARWPKVT 
GYVLAGIVFG PSALGWISIE ALAQARPIAD AALGLLMMEV GRRLDLSWLR RNPELVRSTL
ADITLSFALI FIFALWLVGL TPAWAAATAA VTMASAPAVV LLTIEEAKAQ GQVTERIILH
TALGSAASFV AFAVVLGIVH AELSEDWLNA LVHPLWVVVG AFLVGGIGTW LALRIARTLP
KGSLAQVFVL IACALLAVGI ARMLAVPVFL TLFLMGVLLA SRDRQQTLRY TALPEGHWLL
AIVLFVIVGA SLPWQDFTWQ AGLQALGLLL VRAAAKAGAM AWSGGSMPLP KRLLVGMGIQ
PLSATAVFMA YEIASLYPEV GRSALTLPLF AAAMMELVGP ALCRLALHRS DECESGERDR
GGIA